RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 OR14J1Q9UGF5 321 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 A0A1W2PPV9 198 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 LRRC30A6NM36 301 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 DVL2O14641 736 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 SELENOFO60613 162 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 PDGFBP01127 241 aaPredicted RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 LAP3P28838 519 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 C21orf58P58505 322 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 TIAL1Q01085 375 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 NHSL2Q5HYW2 709 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 NDNFQ8TB73 568 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 APOBEC4Q8WW27 367 aaKnown RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 TMIGD2Q96BF3 282 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 KCTD12Q96CX2 325 aaKnown RBP8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 NELFAQ9H3P2 528 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 GPATCH2Q9NW75 528 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 REV1Q9UBZ9 1251 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 KCNE3Q9Y6H6 103 aa8.59□□□□□ -1.03
CLTCL1-208ENST00000615606 TCRBV5S2A0A599 114 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 ALG1L2C9J202 215 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 RAB3DO95716 219 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 HIST1H1CP16403 213 aaKnown RBP8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 RBM39Q14498 530 aaKnown RBP8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 TBRG1Q3YBR2 411 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 EGFL6Q8IUX8 553 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 FAM26EQ8N5C1 309 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF709Q8N972 641 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF610Q8N9Z0 462 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 CPEB3Q8NE35 698 aaKnown RBP8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 OR56B1Q8NGI3 324 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 LIPHQ8WWY8 451 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 ST6GALNAC5Q9BVH7 336 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 MOB1AQ9H8S9 216 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 SLC25A19Q9HC21 320 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 GALNT9Q9HCQ5 603 aa8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 MRPL15Q9P015 296 aaKnown RBP8.59□□□□□ -1.04
CLTCL1-208ENST00000615606 ACOD1A6NK06 481 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 A8MV72 311 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF736B4DX44 427 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 LILRB5O75023 590 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CNOT4O95628 575 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CRYAAP02489 173 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CAPNS1P04632 268 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SCG5P05408 212 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CYC1P08574 325 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SBK2P0C263 348 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SPI1P17947 270 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 UCNP55089 124 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 LTBQ06643 244 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 WIPI1Q5MNZ9 446 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SERPINA12Q8IW75 414 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 OR6V1Q8N148 313 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PRR18Q8N4B5 295 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 DRAXINQ8NBI3 349 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 GABARAPL3Q9BY60 117 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 WDR54Q9H977 334 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PRSS37A4D1T9 235 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CREBL2O60519 120 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 UQCRC1P31930 480 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CX3CR1P49238 355 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 MC2RQ01718 297 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 MEF2DQ14814 521 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PXKQ7Z7A4 578 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PIAS4Q8N2W9 510 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 KCNG3Q8TAE7 436 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SLC35B4Q969S0 331 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 TMEM43Q9BTV4 400 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ZNF385DQ9H6B1 395 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 NOX4Q9NPH5 578 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 FBXL3Q9UKT7 428 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SPAG17Q6Q759 2223 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 A0A087WUJ7 227 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PTH2RP49190 550 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 DIO1P49895 249 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ERVK-16P61578 105 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 PPA1Q15181 289 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 COX15Q7KZN9 410 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 DOK3Q7L591 496 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 LRRC28Q86X40 367 aaPredicted RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 KIF18BQ86Y91 864 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ELMOD2Q8IZ81 293 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 SLC22A24Q8N4F4 322 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 NKAIN3Q8N8D7 197 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ASCC1Q8N9N2 400 aaKnown RBP8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 GALNT11Q8NCW6 608 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 ABHD4Q8TB40 342 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CHPT1Q8WUD6 406 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 HSD17B8Q92506 261 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 TOMM40LQ969M1 308 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 MED18Q9BUE0 208 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 EMC7Q9NPA0 242 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 FBXO8Q9NRD0 319 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 RDH8Q9NYR8 311 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 NKX6-3A6NJ46 265 aa8.58□□□□□ -1.04
CLTCL1-208ENST00000615606 TRIM64CA6NLI5 447 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms