RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 OR9Q1Q8NGQ5 310 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 OR2T4Q8NH00 348 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ROBO4Q8WZ75 1007 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 GGHQ92820 318 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 SLC25A44Q96H78 314 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 TXNDC15Q96J42 360 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 COPS4Q9BT78 406 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 MRPL13Q9BYD1 178 aaKnown RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 RACGAP1Q9H0H5 632 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 SYT4Q9H2B2 425 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 MED20Q9H944 212 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 BCO1Q9HAY6 547 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 RPRD1BQ9NQG5 326 aaKnown RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 EMC3Q9P0I2 261 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 KLHL9Q9P2J3 617 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 CLCF1Q9UBD9 225 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ING1Q9UK53 422 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 MOKQ9UQ07 419 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 A0A087WXM4 84 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 A0A1B0GUH1 482 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 SLC35F4A4IF30 521 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 SLC22A20A6NK97 555 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF724A8MTY0 619 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 AHRRA9YTQ3 701 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 H7C1C5 153 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 RGS10O43665 173 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF432O94892 652 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 GLCEO94923 617 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 CDK1P06493 297 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 HTR1AP08908 422 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 COX6B1P14854 86 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 EEF1B2P24534 225 aaKnown RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 CRABP1P29762 137 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 CENPAP49450 140 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF133P52736 654 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 CLDN17P56750 224 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 LCN6P62502 163 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 TUBA4AP68366 448 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 RUNX1T1Q06455 604 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 POU4F2Q12837 409 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 SF3B4Q15427 424 aaKnown RBP eCLIP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 HIST3H3Q16695 136 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 KLHL22Q53GT1 634 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 LINC01590Q5TEZ4 76 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 DNM1P34Q6PK57 102 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 SPNS3Q6ZMD2 512 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 PRSS48Q7RTY5 328 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 FGD2Q7Z6J4 655 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 WDFY1Q8IWB7 410 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 TMEM123Q8N131 208 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 POMGNT2Q8NAT1 580 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 FNDC9Q8TBE3 224 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 ABHD3Q8WU67 409 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 MYDGFQ969H8 173 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 OTULINQ96BN8 352 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 NMD3Q96D46 503 aaKnown RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 LGALS12Q96DT0 336 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 RNFT2Q96EX2 444 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF385AQ96PM9 386 aaKnown RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 OR2M2Q96R28 347 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 TEAD3Q99594 435 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 RHNO1Q9BSD3 238 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 JAM3Q9BX67 310 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 OR51V1Q9H2C8 321 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 AMBNQ9NP70 447 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 FGF20Q9NP95 211 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 ASB6Q9NWX5 421 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 TNFRSF10DQ9UBN6 386 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 SCOCQ9UIL1 159 aa10.13□□□□□ -0.79
SLIRP-212ENST00000613856 EXOGQ9Y2C4 368 aaKnown RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 KLF2Q9Y5W3 355 aaPredicted RBP10.13□□□□□ -0.79
SLIRP-212ENST00000613856 IGLV1-36A0A0B4J1U3 117 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 TRGV8A0A0C4DH27 118 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF726A6NNF4 738 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 PTGES3LE9PB15 166 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 AQP8O94778 261 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 CLUP10909 449 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 GSTT1P30711 240 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 PTGS2P35354 604 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 BLVRAP53004 296 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 CDH15P55291 814 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 CLRN1P58418 232 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 RPS7P62081 194 aaKnown RBP10.12□□□□□ -0.79
SLIRP-212ENST00000613856 ADORA2A-AS1P86434 159 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 ACSF3Q4G176 576 aaPredicted RBP10.12□□□□□ -0.79
SLIRP-212ENST00000613856 KLHL12Q53G59 568 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 THEM4Q5T1C6 240 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 RNLSQ5VYX0 342 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 GTF2IRD2BQ6EKJ0 949 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 B3GNT6Q6ZMB0 384 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 GTF2IRD2Q86UP8 949 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 OR6V1Q8N148 313 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 SGCDQ92629 289 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 INTS12Q96CB8 462 aaKnown RBP10.12□□□□□ -0.79
SLIRP-212ENST00000613856 EMC6Q9BV81 110 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 PRRG4Q9BZD6 226 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 NUAK2Q9H093 628 aa10.12□□□□□ -0.79
SLIRP-212ENST00000613856 MARCH7Q9H992 704 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms