RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 PAPD4Q6PIY7 484 aaKnown RBP11.36□□□□□ -0.59
CDH1-212ENST00000611625 GRINAQ7Z429 371 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 SLC6A18Q96N87 628 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 SMIM3Q9BZL3 60 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 C6orf106Q9H6K1 298 aaPredicted RBP11.36□□□□□ -0.59
CDH1-212ENST00000611625 LDAHQ9H6V9 325 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 ERVMER34-1Q9H9K5 563 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 DOCK3Q8IZD9 2030 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 ZNF749O43361 778 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 SNAPINO95295 136 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 JMJD7P0C870 316 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 ELAVL1Q15717 326 aaKnown RBP11.36□□□□□ -0.59
CDH1-212ENST00000611625 TMEM176BQ3YBM2 270 aaPredicted RBP11.36□□□□□ -0.59
CDH1-212ENST00000611625 TMEM196Q5HYL7 178 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 WDR88Q6ZMY6 472 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 ZNF764Q96H86 408 aaPredicted RBP11.36□□□□□ -0.59
CDH1-212ENST00000611625 SPIN2AQ99865 258 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 SPIN2BQ9BPZ2 258 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 FGF21Q9NSA1 209 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 SDHAF2Q9NX18 166 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 SERGEFQ9UGK8 458 aa11.36□□□□□ -0.59
CDH1-212ENST00000611625 MAP1BP46821 2468 aaKnown RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 DCTDP32321 178 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 GPNMBQ14956 572 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 MPEG1Q2M385 716 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ARIH2OSQ8N7S6 290 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 NXF5Q9H1B4 397 aaKnown RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 POFUT1Q9H488 388 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ZNF346Q9UL40 294 aaKnown RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 EXOGQ9Y2C4 368 aaKnown RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 PCM1Q15154 2024 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 NUDT21O43809 227 aaKnown RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 STK17BO94768 372 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ZNF93P35789 620 aaPredicted RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 PMPCAQ10713 525 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 FGL2Q14314 439 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ACKR1Q16570 336 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 RTL6Q6ICC9 239 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 MIB2Q96AX9 1013 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 NRTNQ99748 197 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ARPC5LQ9BPX5 153 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 MICU1Q9BPX6 476 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 UNKLQ9H9P5 680 aaKnown RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 PLPP2O43688 288 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 SSX5O60225 188 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ACHEP22303 614 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 COX14Q96I36 57 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 BARHL1Q9BZE3 327 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ULBP2Q9BZM5 246 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 FKRPQ9H9S5 495 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 SCPEP1Q9HB40 452 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 TAS2R4Q9NYW5 299 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 KLK11Q9UBX7 282 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 A0A0B4J2E0 115 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 LOC107986453A0A1B0GWG9 222 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 A0A1B0GX12 115 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 PRKNO60260 465 aaPredicted RBP11.35□□□□□ -0.59
CDH1-212ENST00000611625 PPICP45877 212 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 ZBTB37Q5TC79 503 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 NKAIN2Q5VXU1 208 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 LPCAT3Q6P1A2 487 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 MORN4Q8NDC4 146 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 OR5D18Q8NGL1 313 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 NINJ1Q92982 152 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 UPRTQ96BW1 309 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 MARVELD1Q9BSK0 173 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 MCOLN1Q9GZU1 580 aa11.35□□□□□ -0.59
CDH1-212ENST00000611625 FBXO24O75426 580 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 DOC2BQ14184 412 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 MEX3BQ6ZN04 569 aaKnown RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 TP53I13Q8NBR0 393 aaPredicted RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 FBLIM1Q8WUP2 373 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 CDC42EP2O14613 210 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 TPOP07202 933 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 OTX2P32243 289 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 CSNK1EP49674 416 aaKnown RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 UBE2MP61081 183 aaKnown RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 MLF2Q15773 248 aaPredicted RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 UNQ6126/PRO20091Q6UXV3 157 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 GABRG1Q8N1C3 465 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 PELI1Q96FA3 418 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 MRGPRX1Q96LB2 322 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 RPS10P5Q9NQ39 176 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 SNRPGP15A8MWD9 76 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 SULT1C2O00338 296 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 WDPCPO95876 746 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 IFNA2P01563 188 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 AKR1C2P52895 323 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 CNN3Q15417 329 aaKnown RBP11.34□□□□□ -0.59
CDH1-212ENST00000611625 BEND4Q6ZU67 534 aa11.34□□□□□ -0.59
CDH1-212ENST00000611625 ZNF709Q8N972 641 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms