RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 OR52A1Q9UKL2 312 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 A0A0G2JMZ2 1700 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PRAMEF27A3QJZ7 478 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ANKRD30BLA7E2S9 258 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ARPC1BO15143 372 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZFC3H1O60293 1989 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ANK1P16157 1881 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 UGT2B10P36537 528 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 NR4A2P43354 598 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MTCP1P56278 107 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CXADRP78310 365 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SF3A2Q15428 464 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 STEAP3Q658P3 488 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MAML2Q8IZL2 1156 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SLC43A2Q8N370 569 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ORAI1Q96D31 301 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 TAAR9Q96RI9 348 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 MNTQ99583 582 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ISG20L2Q9H9L3 353 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 DNAJB12Q9NXW2 375 aaKnown RBP6.62□□□□□ -1.35
CSDE1-218ENST00000610726 PLA2G3Q9NZ20 509 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 SIGLEC7Q9Y286 467 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 CHST2Q9Y4C5 530 aa6.62□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF318Q5VUA4 2279 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 FOXS1O43638 330 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 TBXA2RP21731 343 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 MTNR1BP49286 362 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 GLYATL3Q5SZD4 288 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 VHLLQ6RSH7 139 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF321PQ8N8H1 164 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 DNAAF1Q8NEP3 725 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 GRPEL2Q8TAA5 225 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 DCLRE1CQ96SD1 692 aaKnown RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 MRI1Q9BV20 369 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 KCNG2Q9UJ96 466 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 SLC5A6Q9Y289 635 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 GREB1Q4ZG55 1949 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 PRSS37A4D1T9 235 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 CDC42EP2O14613 210 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 OR7C1O76099 320 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 EFEMP2O95967 443 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 FCGR2AP12318 317 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF44P15621 663 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 SRMP19623 302 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 HTR2CP28335 458 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 TGM4P49221 684 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 VEGFCP49767 419 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 HMGA2P52926 109 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 DBPQ10586 325 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 EBPQ15125 230 aaKnown RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 FAM27D1Q5T7N8 215 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 THSD4Q6ZMP0 1018 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 CFAP77Q6ZQR2 320 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 ANKRD37Q7Z713 158 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 BHLHE23Q8NDY6 225 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 GJC3Q8NFK1 279 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 OR2T35Q8NGX2 323 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 MRGPRX4Q96LA9 322 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF681Q96N22 645 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 OPALINQ96PE5 141 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 OR2S2Q9NQN1 319 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 MYOTQ9UBF9 498 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 CGGBP1Q9UFW8 167 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 EXO1Q9UQ84 846 aaKnown RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 B3GALT5Q9Y2C3 310 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 PCDHGA1Q9Y5H4 931 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 B3GALT1Q9Y5Z6 326 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 D6RAR5 112 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF587BE7ETH6 402 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 FFAR1O14842 300 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 VAMP5O95183 116 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 DIRAS3O95661 229 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 BDKRB2P30411 391 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 SNRPD2P62316 118 aaKnown RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 SF3B4Q15427 424 aaKnown RBP eCLIP6.61□□□□□ -1.353e-8■■■□□ 18.4
CSDE1-218ENST00000610726 GRK1Q15835 563 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 DEFB109BQ30KR1 87 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 YIF1BQ5BJH7 314 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 DMRTC1Q5HYR2 192 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 SSX6Q7RTT6 188 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 D2HGDHQ8N465 521 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 KCTD12Q96CX2 325 aaKnown RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 TMEM246Q9BRR3 403 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF471Q9BX82 626 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-218ENST00000610726 TXNIPQ9H3M7 391 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 LIN7BQ9HAP6 207 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 MMP25Q9NPA2 562 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 FBXL4Q9UKA2 621 aa6.61□□□□□ -1.35
CSDE1-218ENST00000610726 HRO43593 1189 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 PRSS23O95084 383 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 APEHP13798 732 aaKnown RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SEC61A1P61619 476 aaKnown RBP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 FABP5Q01469 135 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 AQP6Q13520 282 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 TRA2AQ13595 282 aaKnown RBP eCLIP6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SLC10A1Q14973 349 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 ZNF74Q16587 644 aa6.6□□□□□ -1.35
CSDE1-218ENST00000610726 SLC36A2Q495M3 483 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms