RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	NPEPL1	Q8NDH3	523 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR4F15	Q8NGB8	312 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR51G2	Q8NGK0	314 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ABTB1	Q969K4	478 aa	Predicted RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ISOC1	Q96CN7	298 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	NMD3	Q96D46	503 aa	Known RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR5B2	Q96R09	309 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	TEAD3	Q99594	435 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	NAA50	Q9GZZ1	169 aa	Known RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CHCHD3	Q9NX63	227 aa	Known RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CLEC2D	Q9UHP7	191 aa		12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ZNF346	Q9UL40	294 aa	Known RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	EXOG	Q9Y2C4	368 aa	Known RBP	12.05	□□□□□ -0.48
PPHLN1-223	ENST00000610488	AKAP6	Q13023	2319 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488		A0A1W2PNR3	127 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR6C68	A6NDL8	312 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MYL12B	O14950	172 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	EEF1E1	O43324	174 aa	Known RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	FKBP2	P26885	142 aa	Known RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SHC1	P29353	583 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SRD5A2	P31213	254 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CDKN2A	P42771	156 aa	Known RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ETV1	P50549	477 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	AGFG1	P52594	562 aa	Known RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR2B6	P58173	313 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	TMED1	Q13445	227 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	VASN	Q6EMK4	673 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	PAQR6	Q6TCH4	344 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	H1FNT	Q75WM6	255 aa	Predicted RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MED12L	Q86YW9	2145 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	NANOGP1	Q8N7R0	232 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SCAI	Q8N9R8	606 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ZPLD1	Q8TCW7	415 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	KISS1R	Q969F8	398 aa	Predicted RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR5M11	Q96RB7	305 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	DDO	Q99489	341 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	FUNDC2	Q9BWH2	189 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MND1	Q9BWT6	205 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	PRDM14	Q9GZV8	571 aa		12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MAP1A	P78559	2803 aa	Predicted RBP	12.04	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR2M5	A3KFT3	312 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MS4A18	H0YCH9	400 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CTAG2	O75638	210 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	AKR7A3	O95154	331 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	HSMCR30	P0CW71	290 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ZNF17	P17021	662 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	GSTT1	P30711	240 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CEACAM8	P31997	349 aa	Predicted RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CLK1	P49759	484 aa	Known RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	LGALS3BP	Q08380	585 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	PUDP	Q08623	228 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ZP4	Q12836	540 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MS4A18	Q3C1V0	323 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MEST	Q5EB52	335 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	LCN1P1	Q5VSP4	162 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	NSUN5P2	Q63ZY6	315 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	KDM8	Q8N371	416 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR14L1P	Q8NHC6	308 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	RNASE6	Q93091	150 aa	Known RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	C12orf43	Q96C57	262 aa	Known RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	YIPF6	Q96EC8	236 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	WDYHV1	Q96HA8	205 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	PIGQ	Q9BRB3	760 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	YIPF3	Q9GZM5	350 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	CLEC4M	Q9H2X3	399 aa	Predicted RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	RPRD1B	Q9NQG5	326 aa	Known RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	HDGFL3	Q9Y3E1	203 aa		12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.03	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ITPR3	Q14573	2671 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488		A0A1W2PRG6	482 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488		H7C1C5	153 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ZNF701	M0R085	212 aa	Predicted RBP	12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ARHGEF9	O43307	516 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	REN	P00797	406 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	IGHM	P01871	453 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	MRPL3	P09001	348 aa	Known RBP	12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SPI1	P17947	270 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	TIMP3	P35625	211 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ACVR1B	P36896	505 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	PEX19	P40855	299 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	TMBIM6	P55061	237 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	RPL27	P61353	136 aa	Known RBP	12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	LCN6	P62502	163 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SRY	Q05066	204 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ACKR1	Q16570	336 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ARMCX4	Q5H9R4	360 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	ARIH2OS	Q8N7S6	290 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	PROKR2	Q8NFJ6	384 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	OR51L1	Q8NGJ5	315 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	SMPDL3B	Q92485	455 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	DTNBP1	Q96EV8	351 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	COG8	Q96MW5	612 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	NMNAT2	Q9BZQ4	307 aa		12.02	□□□□□ -0.48
PPHLN1-223	ENST00000610488	TXNIP	Q9H3M7	391 aa		12.02	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms