RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MVKQ03426 396 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 PLP2Q04941 152 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 RUNX1T1Q06455 604 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 NFYCQ13952 458 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 HIST3H3Q16695 136 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 TBC1D28Q2M2D7 210 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 AVPI1Q5T686 147 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 THSD4Q6ZMP0 1018 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 NANOGNBQ7Z5D8 188 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 DPPA2Q7Z7J5 298 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 SLC30A8Q8IWU4 369 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 LRRC18Q8N456 261 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 SYT14Q8NB59 555 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 ICA1LQ8NDH6 482 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 OR1J2Q8NGS2 313 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 OR51F2Q8NH61 342 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 OR10A6Q8NH74 314 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 ZNF519Q8TB69 540 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 SNX33Q8WV41 574 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 DYDC1Q8WWB3 177 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 TAMM41Q96BW9 452 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 ATP6V1G3Q96LB4 118 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 ZNF426Q9BUY5 554 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 LRMDAQ9H2I8 198 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 C1orf198Q9H425 327 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 SLCO1C1Q9NYB5 712 aa11.43□□□□□ -0.58
POLR2J3-219ENST00000608621 A0A1W2PRG6 482 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 TRMUO75648 421 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 SNAP29O95721 258 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 MMP7P09237 267 aaPredicted RBP11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 ANPEPP15144 967 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 PCGF2P35227 344 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 CRYBB2P43320 205 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 UGT2B15P54855 530 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 PCGF3Q3KNV8 242 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 INTS11Q5TA45 600 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 SHQ1Q6PI26 577 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 NKAIN4Q8IVV8 208 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 RBM15BQ8NDT2 890 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 MRPL13Q9BYD1 178 aaKnown RBP11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 BCL2L14Q9BZR8 327 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 PCDHAC1Q9H158 963 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 NANOGQ9H9S0 305 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 NKIRAS2Q9NYR9 191 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 TRIM33Q9UPN9 1127 aa11.42□□□□□ -0.58
POLR2J3-219ENST00000608621 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 MCIDASD6RGH6 385 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 RGS9O75916 674 aaPredicted RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 AVPP01185 164 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 MT-ND1P03886 318 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 ACADSP16219 412 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 CCNOP22674 350 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 CFPP27918 469 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 APLNRP35414 380 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 AQP2P41181 271 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 GZMMP51124 257 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 TEKQ02763 1124 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 RPL18Q07020 188 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 MOGQ16653 247 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 TSTQ16762 297 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 VMACQ2NL98 169 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 MMEL1Q495T6 779 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 NRN1LQ496H8 165 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 TTMPQ5BVD1 217 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 ACSM5Q6NUN0 579 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 C1orf229Q6ZS94 237 aaPredicted RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 CCDC80Q76M96 950 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 CPEB3Q8NE35 698 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 NOXO1Q8NFA2 376 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 SEMA6DQ8NFY4 1073 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 OR1J1Q8NGS3 322 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 PFN4Q8NHR9 129 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 ZNF418Q8TF45 676 aaPredicted RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 TSPEARQ8WU66 669 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 ZFAND2BQ8WV99 257 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 RASSF5Q8WWW0 418 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 ASB10Q8WXI3 467 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 GTF3AQ92664 365 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 KCNN2Q9H2S1 579 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 ZNF665Q9H7R5 613 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 INIPQ9NRY2 104 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 DECR2Q9NUI1 292 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 INTS9Q9NV88 658 aaKnown RBP11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 SH3GLB1Q9Y371 365 aa11.41□□□□□ -0.58
POLR2J3-219ENST00000608621 IGHV1-69-2A0A0G2JMI3 117 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 CENPBD1B2RD01 187 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 TPD52L2O43399 206 aaKnown RBP11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 PLPP2O43688 288 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 MGRN1O60291 552 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 SHOX2O60902 331 aaPredicted RBP11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 OR7A10O76100 309 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 MPZL1O95297 269 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 PNPP00491 289 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 IGHV3-13P01766 116 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 TNFRSF1BP20333 461 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 DRD4P21917 467 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 CDAP32320 146 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 ZNF133P52736 654 aaPredicted RBP11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 CRYBA2P53672 197 aa11.4□□□□□ -0.58
POLR2J3-219ENST00000608621 HSF2Q03933 536 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms