RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PGA3P0DJD8 388 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 ALOX5APP20292 161 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 GBX2P52951 348 aaPredicted RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CLDN15P56746 228 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CLRN1P58418 232 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CAMK2DQ13557 499 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 SLC17A1Q14916 467 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 PDSS1Q5T2R2 415 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 ZNF684Q5T5D7 378 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CREB3L2Q70SY1 520 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 OR10D3Q8NH80 312 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 PELI1Q96FA3 418 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 TRMT61AQ96FX7 289 aaKnown RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 FOXN4Q96NZ1 517 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 SF3B5Q9BWJ5 86 aaKnown RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 MRPL22Q9NWU5 206 aaKnown RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 GNG8Q9UK08 70 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 NPIPA2E9PIF3 369 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 NPIPA3F8WFD2 350 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 SMAD9O15198 467 aaKnown RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 LRRTM2O43300 516 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 TLX3O43711 291 aaPredicted RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CXCL13O43927 109 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 HLA-DPB1P04440 258 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CD53P19397 219 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 EIF1AXP47813 144 aaKnown RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 CLDN17P56750 224 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 PLEKHG7Q6ZR37 379 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 NOXO1Q8NFA2 376 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 OTOSQ8NHW6 89 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 FNDC8Q8TC99 324 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 COQ7Q99807 217 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 TIGARQ9NQ88 270 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 TXNL4BQ9NX01 149 aaKnown RBP19.23■□□□□ 0.67
USP6NL-204ENST00000606752 KLHDC2Q9Y2U9 406 aa19.23■□□□□ 0.67
USP6NL-204ENST00000606752 IGKV1D-43A0A0B4J1Z2 117 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 TRDV1A0A1B0GX56 115 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 VGLL3A8MV65 326 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 PHYHO14832 338 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 CLPXO76031 633 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 SERPINB10P48595 397 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 SIRPAP78324 504 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 SLC10A1Q14973 349 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 OR9K2Q8NGE7 335 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 TMED9Q9BVK6 235 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 ACKR4Q9NPB9 350 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 KLHL9Q9P2J3 617 aa19.22■□□□□ 0.67
USP6NL-204ENST00000606752 OGG1O15527 345 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 TACSTD2P09758 323 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 FGF9P31371 208 aaPredicted RBP19.21■□□□□ 0.67
USP6NL-204ENST00000606752 LHX2P50458 406 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 FABP5Q01469 135 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 FAM109AQ8N4B1 249 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 SLC26A10Q8NG04 563 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 THEM6Q8WUY1 208 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 CPNE4Q96A23 557 aaPredicted RBP19.21■□□□□ 0.67
USP6NL-204ENST00000606752 SLC6A15Q9H2J7 730 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 CCDC86Q9H6F5 360 aaKnown RBP19.21■□□□□ 0.67
USP6NL-204ENST00000606752 WASF3Q9UPY6 502 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 CSAG2Q9Y5P2 127 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 PRR32B1ATL7 298 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 ACOT7O00154 380 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 SULT1C4O75897 302 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 GALP22466 123 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 RPS27P42677 84 aaKnown RBP19.21■□□□□ 0.67
USP6NL-204ENST00000606752 ENTPD1P49961 510 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 ADAM8P78325 824 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 EGR3Q06889 387 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 HIST3H3Q16695 136 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 CCDC58Q4VC31 144 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 DMKNQ6E0U4 476 aaPredicted RBP19.21■□□□□ 0.67
USP6NL-204ENST00000606752 ARL9Q6T311 187 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 RPTNQ6XPR3 784 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 GLB1L2Q8IW92 636 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 ACOXLQ9NUZ1 547 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 ST6GALNAC2Q9UJ37 374 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 KCNG2Q9UJ96 466 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 GSTK1Q9Y2Q3 226 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 GRIP1Q9Y3R0 1128 aa19.21■□□□□ 0.67
USP6NL-204ENST00000606752 METTL15A6NJ78 407 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 MPZL1O95297 269 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 CARD17Q5XLA6 110 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 C22orf42Q6IC83 251 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 RPL22L1Q6P5R6 122 aaKnown RBP19.2■□□□□ 0.66
USP6NL-204ENST00000606752 TBC1D15Q8TC07 691 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 ASB17Q8WXJ9 295 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 NSMAFQ92636 917 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF385AQ96PM9 386 aaKnown RBP19.2■□□□□ 0.66
USP6NL-204ENST00000606752 SMAD5Q99717 465 aaKnown RBP19.2■□□□□ 0.66
USP6NL-204ENST00000606752 HDHD5Q9BXW7 423 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 SLIRPQ9GZT3 109 aaKnown RBP19.2■□□□□ 0.66
USP6NL-204ENST00000606752 SIAEQ9HAT2 523 aa19.2■□□□□ 0.66
USP6NL-204ENST00000606752 PSMD9O00233 223 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 HRGP04196 525 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 KRT8P05787 483 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 SPARCP09486 303 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 PSKH1P11801 424 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 NR2C1P13056 603 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 ZNF823P16415 610 aa19.19■□□□□ 0.66
USP6NL-204ENST00000606752 TRAM1Q15629 374 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms