RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ALG10BQ5I7T1 473 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 RPS26P11Q5JNZ5 115 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 THEM4Q5T1C6 240 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 REC114Q7Z4M0 266 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 PXKQ7Z7A4 578 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 RBM15BQ8NDT2 890 aaKnown RBP12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 OR10S1Q8NGN2 331 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 DNAJA4Q8WW22 397 aaPredicted RBP12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC41A3Q96GZ6 507 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZIM3Q96PE6 472 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CHIAQ9BZP6 476 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 AKTIPQ9H8T0 292 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TMEM106BQ9NUM4 274 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 GLTPQ9NZD2 209 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SELENONQ9NZV5 590 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TRIM33Q9UPN9 1127 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LRCH1Q9Y2L9 728 aa12.94□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 A0A0G2JPF8 293 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HNRNPCL2B2RXH8 293 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HNRNPCL3B7ZW38 293 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HNRNPCL1O60812 293 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ADH4P08319 380 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HNRNPCL4P0DMR1 293 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MPV17P39210 176 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LRRC74AQ0VAA2 488 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 Q6ZPA2 131 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LRRC28Q86X40 367 aaPredicted RBP12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HIPK4Q8NE63 616 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 OR4K5Q8NGD3 323 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 OR6S1Q8NH40 331 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC35B4Q969S0 331 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 THOC1Q96FV9 657 aaKnown RBP12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 APOPT1Q96IL0 206 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SSBP3Q9BWW4 388 aaPredicted RBP12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 NOX4Q9NPH5 578 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC6A13Q9NSD5 602 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 DCAF16Q9NXF7 216 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CHST2Q9Y4C5 530 aa12.93□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 A0A1B0GWA3 101 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 C11orf98E9PRG8 122 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 G3V4G9 280 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CLPXO76031 633 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 OR6A2O95222 327 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ADORA3P0DMS8 318 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ETFAP13804 333 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TNFRSF1AP19438 455 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TNFSF4P23510 183 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CDKN2CP42773 168 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 DSTNP60981 165 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 RPL15P61313 204 aaKnown RBP12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 FAM189A2Q15884 450 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 BEAN1Q3B7T3 259 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 Q6YL49 198 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 WDR88Q6ZMY6 472 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZNF620Q6ZNG0 422 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MUC20Q8N307 709 aaPredicted RBP12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TMEM86BQ8N661 226 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LINC01006Q8NI28 216 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC25A40Q8TBP6 338 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC38A5Q8WUX1 472 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TMEM54Q969K7 222 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 FAM71F1Q96KD3 344 aaPredicted RBP12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 OR52E6Q96RD3 313 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 PRDM13Q9H4Q3 707 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MRPL39Q9NYK5 338 aaKnown RBP12.92□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 F5H0A9 414 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 DHHO43323 396 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 PRB2P02812 416 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 BGLAPP02818 100 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SHBGP04278 402 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CD55P08174 381 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 CSF1P09603 554 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 NME5P56597 212 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 BPIFB3P59826 476 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 NCALDP61601 193 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 GNB2P62879 340 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 HNRNPA0Q13151 305 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ZMYND11Q15326 602 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 SPRNQ5BIV9 151 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 TTMPQ5BVD1 217 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 GPR157Q5UAW9 335 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MBNL2Q5VZF2 373 aaKnown RBP12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 ULK3Q6PHR2 472 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 IFT20Q8IY31 132 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LRRC18Q8N456 261 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 LSMEM1Q8N8F7 131 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MNS1Q8NEH6 495 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 OR6X1Q8NH79 312 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 KLF14Q8TD94 323 aaPredicted RBP12.91□□□□□ -0.34
NEDD8-MDP1-204ENST00000605847 RAB40AQ8WXH6 277 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms