RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 ZNF347Q96SE7 839 aa14.28□□□□□ -0.12
CCDC12-210ENST00000604181 MCHR1Q99705 422 aa14.28□□□□□ -0.12
CCDC12-210ENST00000604181 SPATA5L1Q9BVQ7 753 aa14.28□□□□□ -0.12
CCDC12-210ENST00000604181 TANC2Q9HCD6 1990 aa14.28□□□□□ -0.12
CCDC12-210ENST00000604181 SLCO1C1Q9NYB5 712 aa14.28□□□□□ -0.12
CCDC12-210ENST00000604181 SLC22A23A1A5C7 686 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 TPD52L2O43399 206 aaKnown RBP14.27□□□□□ -0.13
CCDC12-210ENST00000604181 MT-ATP6P00846 226 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 IGHV1-46P01743 117 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 IGHV3-13P01766 116 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 OPN1SWP03999 348 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 HKR1P10072 659 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 WNT5AP41221 380 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 SELENOVP59797 346 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 DUSP7Q16829 419 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 SPATA46Q5T0L3 261 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 SLC16A14Q7RTX9 510 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 KRT73Q86Y46 540 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 ZNF101Q8IZC7 436 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 TEX29Q8N6K0 151 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 SIGLECL1Q8N7X8 197 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 CPEB3Q8NE35 698 aaKnown RBP14.27□□□□□ -0.13
CCDC12-210ENST00000604181 OR6T1Q8NGN1 323 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 LRRC58Q96CX6 371 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 ARHGDIGQ99819 225 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 TMEM38AQ9H6F2 299 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 ZNF696Q9H7X3 374 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 SAP30LQ9HAJ7 183 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 DECR2Q9NUI1 292 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 TRIM33Q9UPN9 1127 aa14.27□□□□□ -0.13
CCDC12-210ENST00000604181 ZSCAN5BA6NJL1 495 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 CPSF4LA6NMK7 179 aaKnown RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 KPNA4O00629 521 aaPredicted RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 RNF13O43567 381 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 SPRY3O43610 288 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 CHP2O43745 196 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 UBOX5O94941 541 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 MMP15P51511 669 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 HIST3H3Q16695 136 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 TBC1D28Q2M2D7 210 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 MMEL1Q495T6 779 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 SWT1Q5T5J6 900 aaKnown RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 TMEM53Q6P2H8 277 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 ARMC8Q8IUR7 673 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 BCL6BQ8N143 479 aaPredicted RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 LRRC18Q8N456 261 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 RBM15BQ8NDT2 890 aaKnown RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 DEFB108BQ8NET1 73 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 BHLHE22Q8NFJ8 381 aaPredicted RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 OR1J1Q8NGS3 322 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 IPCEF1Q8WWN9 437 aaPredicted RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 CCL17Q92583 94 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 MCHR2Q969V1 340 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 GAL3ST1Q99999 423 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 BCL2L14Q9BZR8 327 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 MMP26Q9NRE1 261 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 GPR160Q9UJ42 338 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 LEF1Q9UJU2 399 aaPredicted RBP14.26□□□□□ -0.13
CCDC12-210ENST00000604181 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
CCDC12-210ENST00000604181 IGKV1D-43A0A0B4J1Z2 117 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 PRORSD1PA6NEY8 169 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 OR6A2O95222 327 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 GPX2P18283 190 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 SLC6A2P23975 617 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 CDAP32320 146 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 MRPL19P49406 292 aaKnown RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 ZNF81P51508 661 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 PCBP3P57721 371 aaKnown RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 TEKQ02763 1124 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 HFEQ30201 348 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 KLF17Q5JT82 389 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 ENTPD8Q5MY95 495 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 THEM4Q5T1C6 240 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 ZNF613Q6PF04 617 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 EPGNQ6UW88 154 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 RANBP3LQ86VV4 465 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 PTOV1Q86YD1 416 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 SYT14Q8NB59 555 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 RAB1CQ92928 201 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 SPDL1Q96EA4 605 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 ZNF48Q96MX3 618 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 CPPED1Q9BRF8 314 aaPredicted RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 MRPL13Q9BYD1 178 aaKnown RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 PARD6BQ9BYG5 372 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 DDX28Q9NUL7 540 aaKnown RBP14.25□□□□□ -0.13
CCDC12-210ENST00000604181 UBAP1Q9NZ09 502 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 ZNF69Q9UC07 566 aa14.25□□□□□ -0.13
CCDC12-210ENST00000604181 LOC100509620A0A075B734 347 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 DNAJC9-AS1A6NH13 148 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 MGRN1O60291 552 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 FARS2O95363 451 aaKnown RBP14.24□□□□□ -0.13
CCDC12-210ENST00000604181 ASAH2BP0C7U1 165 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 CCNOP22674 350 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 DEFA6Q01524 100 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 SLC36A2Q495M3 483 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 PDLIM3Q53GG5 364 aaPredicted RBP14.24□□□□□ -0.13
CCDC12-210ENST00000604181 PABPC1L2AQ5JQF8 200 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 SHISA2Q6UWI4 295 aa14.24□□□□□ -0.13
CCDC12-210ENST00000604181 HIPK4Q8NE63 616 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms