RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 REEP1Q9H902 201 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 FBRSQ9HAH7 460 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 GPATCH2LQ9NWQ4 482 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 LPAR3Q9UBY5 353 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 LOC100289279A0A1B0GTE1 492 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 DHRS7CA6NNS2 312 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF705GA8MUZ8 300 aaPredicted RBP8.09□□□□□ -1.11
COMMD3-215ENST00000602574 AGRPO00253 132 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 GABRPO00591 440 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 YY2O15391 372 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 TLX3O43711 291 aaPredicted RBP8.09□□□□□ -1.11
COMMD3-215ENST00000602574 ECI2O75521 394 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 ERAL1O75616 437 aaKnown RBP8.09□□□□□ -1.11
COMMD3-215ENST00000602574 NDUFB8O95169 186 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 OR2C1O95371 312 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 FABP3P05413 133 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 FCGR3AP08637 254 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 CYB561P49447 251 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 RAB28P51157 221 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 GEMP55040 296 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 GPR18Q14330 331 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 TGIF1Q15583 401 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 MPPE1Q53F39 396 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 OVOS1Q6IE37 1185 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 REEP3Q6NUK4 255 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 KREMEN2Q8NCW0 462 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 OR2AK2Q8NG84 335 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 ADIPOR1Q96A54 375 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 SEMA3CQ99985 751 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 TRMT61BQ9BVS5 477 aaKnown RBP8.09□□□□□ -1.11
COMMD3-215ENST00000602574 WDR13Q9H1Z4 485 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 RHOJQ9H4E5 214 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 MYOZ2Q9NPC6 264 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 NEUROG3Q9Y4Z2 214 aa8.09□□□□□ -1.11
COMMD3-215ENST00000602574 TRAV14DV4A0A0A6YYC5 116 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 IGHV2OR16-5A0A0B4J2B6 119 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TRAPPC2LH3BP13 241 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 B4GALT5O43286 388 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SYNGR4O95473 234 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 ESR1P03372 595 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 ADRA2AP08913 450 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 HNRNPA1P09651 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 OR10J4P0C629 311 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 OR10J1P30954 320 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 GJA4P35212 333 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 NPY4RP50391 375 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 H2BFSP57053 126 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RPS23P62266 143 aaKnown RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SNRPGP62308 76 aaKnown RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RING1Q06587 406 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 CBFBQ13951 182 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SURF1Q15526 300 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 XKR7Q5GH72 579 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 LDLRAD2Q5SZI1 272 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 PRR27Q6MZM9 219 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 NHLRC1Q6VVB1 395 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SPRED2Q7Z698 418 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 BMPERQ8N8U9 685 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SLC38A9Q8NBW4 561 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RAB1CQ92928 201 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RASD2Q96D21 266 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 REEP6Q96HR9 211 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 THOC3Q96J01 351 aaKnown RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 IL17FQ96PD4 163 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 PBDC1Q9BVG4 233 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 BOCQ9BWV1 1114 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 CNTD2Q9H8S5 307 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 AMBNQ9NP70 447 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 THSD1Q9NS62 852 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 DECR2Q9NUI1 292 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 VPS29Q9UBQ0 182 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RAB22AQ9UL26 194 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RNF150Q9ULK6 438 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 LRP12Q9Y561 859 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 LTBP1Q14766 1721 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TRBC2A0A5B9 178 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TNFSF13O75888 250 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 MBPP02686 304 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM225BP0DP42 221 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 MSR1P21757 451 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 BACE1P56817 501 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 CCL7P80098 99 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 PPP1R8Q12972 351 aaKnown RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF750Q32MQ0 723 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 VWA2Q5GFL6 755 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 CLEC20AQ6ZU45 233 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 GPRIN1Q7Z2K8 1008 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 RD3Q7Z3Z2 195 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 VTCN1Q7Z7D3 282 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 CALHM3Q86XJ0 350 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TUSC5Q8IXB3 177 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 EEF1AKMT1Q8WVE0 214 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SMIM4Q8WVI0 70 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 BCL2L2Q92843 193 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 GPR146Q96CH1 333 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 POM121L2Q96KW2 1035 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms