RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 C1orf198Q9H425 327 aa11.25□□□□□ -0.61
RPS28-204ENST00000602140 MEPEQ9NQ76 525 aaPredicted RBP11.25□□□□□ -0.61
RPS28-204ENST00000602140 HINT3Q9NQE9 182 aaKnown RBP11.25□□□□□ -0.61
RPS28-204ENST00000602140 GRIP1Q9Y3R0 1128 aa11.25□□□□□ -0.61
RPS28-204ENST00000602140 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 IQCMA0A1B0GVH7 501 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 A0A1W2PRG6 482 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 MCIDASD6RGH6 385 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 VENTXO95231 258 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 SNAP29O95721 258 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 F13BP05160 661 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 RAD52P43351 418 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 ZNF84P51523 738 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 CRYBA2P53672 197 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 UCP2P55851 309 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 LMO4P61968 165 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 PLP2Q04941 152 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 RPL18Q07020 188 aaKnown RBP11.24□□□□□ -0.61
RPS28-204ENST00000602140 HIST3H3Q16695 136 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 VMACQ2NL98 169 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 SHQ1Q6PI26 577 aaKnown RBP11.24□□□□□ -0.61
RPS28-204ENST00000602140 DEF8Q6ZN54 512 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 MEX3DQ86XN8 651 aaKnown RBP11.24□□□□□ -0.61
RPS28-204ENST00000602140 RBM15BQ8NDT2 890 aaKnown RBP11.24□□□□□ -0.61
RPS28-204ENST00000602140 NOXO1Q8NFA2 376 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 OR1J2Q8NGS2 313 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 OR51F2Q8NH61 342 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 ZNF519Q8TB69 540 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 SNX33Q8WV41 574 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 STON2Q8WXE9 905 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
RPS28-204ENST00000602140 BCL2L14Q9BZR8 327 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 LRMDAQ9H2I8 198 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
RPS28-204ENST00000602140 SLCO1C1Q9NYB5 712 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 TRIM33Q9UPN9 1127 aa11.24□□□□□ -0.61
RPS28-204ENST00000602140 A0A0A6YYJ9 748 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
RPS28-204ENST00000602140 MT-ND1P03886 318 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
RPS28-204ENST00000602140 ACADSP16219 412 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 FUT1P19526 365 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 TNFRSF1BP20333 461 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 GZMMP51124 257 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 UGT2B15P54855 530 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 MVKQ03426 396 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 HSF2Q03933 536 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 PCGF3Q3KNV8 242 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 AVPI1Q5T686 147 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 FAHD2BQ6P2I3 314 aaPredicted RBP11.23□□□□□ -0.61
RPS28-204ENST00000602140 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 CCDC80Q76M96 950 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 TSPEARQ8WU66 669 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 RASSF5Q8WWW0 418 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 ASB10Q8WXI3 467 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 GTF3AQ92664 365 aaKnown RBP11.23□□□□□ -0.61
RPS28-204ENST00000602140 FAHD2AQ96GK7 314 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 SEPHS2Q99611 448 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 NANOGQ9H9S0 305 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 INIPQ9NRY2 104 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 SH3GLB1Q9Y371 365 aa11.23□□□□□ -0.61
RPS28-204ENST00000602140 TRAV20A0A0B4J274 112 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 IGHV1-69-2A0A0G2JMI3 117 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 TPD52L2O43399 206 aaKnown RBP11.22□□□□□ -0.61
RPS28-204ENST00000602140 SHOX2O60902 331 aaPredicted RBP11.22□□□□□ -0.61
RPS28-204ENST00000602140 RGS9O75916 674 aaPredicted RBP11.22□□□□□ -0.61
RPS28-204ENST00000602140 OR7A10O76100 309 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 MMP7P09237 267 aaPredicted RBP11.22□□□□□ -0.61
RPS28-204ENST00000602140 ANPEPP15144 967 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 DRD4P21917 467 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 CCNOP22674 350 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 CDAP32320 146 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 APLNRP35414 380 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 AQP2P41181 271 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 CRYBB2P43320 205 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
RPS28-204ENST00000602140 TAS2R41P59536 307 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 TEKQ02763 1124 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 GLO1Q04760 184 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 PABPC1L2AQ5JQF8 200 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 NANOGP8Q6NSW7 305 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 C12orf54Q6X4T0 127 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 HDDC2Q7Z4H3 204 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 CPEB3Q8NE35 698 aaKnown RBP11.22□□□□□ -0.61
RPS28-204ENST00000602140 SEMA6DQ8NFY4 1073 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 OR1J1Q8NGS3 322 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 MOSPD2Q8NHP6 518 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 TMEM255BQ8WV15 326 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 SGTBQ96EQ0 304 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 MAGEB18Q96M61 343 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 KCNN2Q9H2S1 579 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 ZNF665Q9H7R5 613 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 NPHS2Q9NP85 383 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 C20orf141Q9NUB4 165 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 DECR2Q9NUI1 292 aa11.22□□□□□ -0.61
RPS28-204ENST00000602140 NKIRAS2Q9NYR9 191 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms