RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PTDSS1P48651 473 aaKnown RBP16.17■□□□□ 0.18
PNKP-213ENST00000599543 BIDP55957 195 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 MS4A2Q01362 244 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 FXNQ16595 210 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 CDK20Q8IZL9 346 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 ZCCHC24Q8N2G6 241 aaKnown RBP16.17■□□□□ 0.18
PNKP-213ENST00000599543 LRRC17Q8N6Y2 441 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 PRRC1Q96M27 445 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 GORASP2Q9H8Y8 452 aa16.17■□□□□ 0.18
PNKP-213ENST00000599543 MEPEQ9NQ76 525 aaPredicted RBP16.17■□□□□ 0.18
PNKP-213ENST00000599543 GYG2O15488 501 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 UBL3O95164 117 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 STAMBPO95630 424 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 ADRA2AP08913 450 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 IFNGR1P15260 489 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 ZNF14P17017 642 aaPredicted RBP16.16■□□□□ 0.18
PNKP-213ENST00000599543 GIFP27352 417 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 GALK2Q01415 458 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 FAM120AOSQ5T036 256 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 NHLRC1Q6VVB1 395 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 WDFY1Q8IWB7 410 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 DENND2DQ9H6A0 471 aaPredicted RBP16.16■□□□□ 0.18
PNKP-213ENST00000599543 NANSQ9NR45 359 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 FBXL3Q9UKT7 428 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 SAMD4AQ9UPU9 718 aaKnown RBP16.16■□□□□ 0.18
PNKP-213ENST00000599543 ENPP4Q9Y6X5 453 aa16.16■□□□□ 0.18
PNKP-213ENST00000599543 TMEM129A0AVI4 362 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 TGFAP01135 160 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 MT-ND1P03886 318 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 FUT1P19526 365 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 GIPRP48546 466 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 CHN2P52757 468 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 RAB1AP62820 205 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 BNIP1Q12981 228 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 ZNF74Q16587 644 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 IL17RELQ6ZVW7 336 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 SLC35D2Q76EJ3 337 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 OR6X1Q8NH79 312 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 MRPL24Q96A35 216 aaKnown RBP16.15■□□□□ 0.18
PNKP-213ENST00000599543 PYURFQ96I23 114 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 MPP4Q96JB8 637 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 C7orf34Q96L11 122 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 SEPHS2Q99611 448 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 FNDC11Q9BVV2 318 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 TPK1Q9H3S4 243 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 MAN2C1Q9NTJ4 1040 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 C20orf141Q9NUB4 165 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 ZNF224Q9NZL3 707 aa16.15■□□□□ 0.18
PNKP-213ENST00000599543 PRPF19Q9UMS4 504 aaKnown RBP16.15■□□□□ 0.18
PNKP-213ENST00000599543 LRP5LA4QPB2 252 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 M0R233 179 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 RNF13O43567 381 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ENTPD5O75356 428 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 PRSS23O95084 383 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ZNF35P13682 527 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 EVX1P49640 407 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ERFP50548 548 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 RPS23P62266 143 aaKnown RBP16.14■□□□□ 0.17
PNKP-213ENST00000599543 TBPL2Q6SJ96 375 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 PIWIL3Q7Z3Z3 882 aaKnown RBP16.14■□□□□ 0.17
PNKP-213ENST00000599543 ZNF786Q8N393 782 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 UBASH3BQ8TF42 649 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 TMEM239Q8WW34 195 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ZNF566Q969W8 418 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ZNF75AQ96N20 296 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ZNF426Q9BUY5 554 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 MRPL37Q9BZE1 423 aaKnown RBP16.14■□□□□ 0.17
PNKP-213ENST00000599543 C1orf21Q9H246 121 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 NDUFAF4Q9P032 175 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ACTR3BQ9P1U1 418 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 ZNF229Q9UJW7 825 aa16.14■□□□□ 0.17
PNKP-213ENST00000599543 SYNGR3O43761 229 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 HIST1H2ABP04908 130 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 UMPSP11172 480 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 THBS2P35442 1172 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 GLRXP35754 106 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 ST3GAL3Q11203 375 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 HIST3H2AQ7L7L0 130 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 DHFR2Q86XF0 187 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 OFCC1Q8IZS5 231 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 HIST1H2ACQ93077 130 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 TMEM54Q969K7 222 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 SNX18Q96RF0 628 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 SYT3Q9BQG1 590 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 BTBD10Q9BSF8 475 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 SLC19A3Q9BZV2 496 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 POLR2J2Q9GZM3 115 aaKnown RBP16.13■□□□□ 0.17
PNKP-213ENST00000599543 POLR2J3Q9H1A7 115 aaKnown RBP16.13■□□□□ 0.17
PNKP-213ENST00000599543 TAS2R5Q9NYW4 299 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 GLTPQ9NZD2 209 aa16.13■□□□□ 0.17
PNKP-213ENST00000599543 TCRBV5S2A0A599 114 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 SEMG1P04279 462 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 TACSTD2P09758 323 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 OR8G3PP0DMU2 310 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 APEX1P27695 318 aaKnown RBP16.12■□□□□ 0.17
PNKP-213ENST00000599543 ZP4Q12836 540 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 TRIM25Q14258 630 aaKnown RBP16.12■□□□□ 0.17
PNKP-213ENST00000599543 MELKQ14680 651 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 RAB39AQ14964 217 aa16.12■□□□□ 0.17
PNKP-213ENST00000599543 TRAM2Q15035 370 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms