RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MRPL19P49406 292 aaKnown RBP8.45□□□□□ -1.06
LIG1-209ENST00000596104 ZNF81P51508 661 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 MMP15P51511 669 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 LCN2P80188 198 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 GLO1Q04760 184 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 MOGQ16653 247 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 HIST3H3Q16695 136 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 TSTQ16762 297 aaKnown RBP8.45□□□□□ -1.06
LIG1-209ENST00000596104 TBC1D28Q2M2D7 210 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 SLC36A2Q495M3 483 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 HHATQ5VTY9 493 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 ZNF613Q6PF04 617 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 DOK3Q7L591 496 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 SLC16A14Q7RTX9 510 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 RETREG3Q86VR2 466 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 RANBP3LQ86VV4 465 aaPredicted RBP8.45□□□□□ -1.06
LIG1-209ENST00000596104 FUNDC1Q8IVP5 155 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 CPEB3Q8NE35 698 aaKnown RBP8.45□□□□□ -1.06
LIG1-209ENST00000596104 DEFB108BQ8NET1 73 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 OR1J2Q8NGS2 313 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 ELMOD3Q96FG2 381 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 TIMD4Q96H15 378 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 SEPHS2Q99611 448 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 GAL3ST1Q99999 423 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 C1QTNF5Q9BXJ0 243 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 IKZF5Q9H5V7 419 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 EVA1AQ9H8M9 152 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 RNF121Q9H920 327 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 DECR2Q9NUI1 292 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 VAPAQ9P0L0 249 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 LEF1Q9UJU2 399 aaPredicted RBP8.45□□□□□ -1.06
LIG1-209ENST00000596104 TRIM33Q9UPN9 1127 aa8.45□□□□□ -1.06
LIG1-209ENST00000596104 IQCMA0A1B0GVH7 501 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 DNAJC9-AS1A6NH13 148 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZSCAN5BA6NJL1 495 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 M0R3H8 397 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 SPRY3O43610 288 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 OR6A2O95222 327 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 CH25HO95992 272 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 MT-ND5P03915 603 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ADH4P08319 380 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 GPX2P18283 190 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 PPIBP23284 216 aaKnown RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 PRTN3P24158 256 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 AQP1P29972 269 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 WNT5AP41221 380 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZNF133P52736 654 aaPredicted RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 DEFA6Q01524 100 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 SCARB2Q14108 478 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 NPTX1Q15818 432 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 KLF17Q5JT82 389 aaPredicted RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 PAGE3Q5JUK9 113 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZNF771Q7L3S4 317 aaPredicted RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 TSPYL5Q86VY4 417 aaPredicted RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZNF101Q8IZC7 436 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 LRRC17Q8N6Y2 441 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 SIGLECL1Q8N7X8 197 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ICA1LQ8NDH6 482 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 RBM15BQ8NDT2 890 aaKnown RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 BHLHE22Q8NFJ8 381 aaPredicted RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 GPR32P1Q8NGA4 272 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 OR1J1Q8NGS3 322 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 CCL17Q92583 94 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 POP5Q969H6 163 aaKnown RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 MCHR2Q969V1 340 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZBTB9Q96C00 473 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 MARS2Q96GW9 593 aaKnown RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 DUX5Q96PT3 197 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZNF347Q96SE7 839 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 MCHR1Q99705 422 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ARHGDIGQ99819 225 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZNF426Q9BUY5 554 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 MRPL13Q9BYD1 178 aaKnown RBP8.44□□□□□ -1.06
LIG1-209ENST00000596104 LRMDAQ9H2I8 198 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 CENPHQ9H3R5 247 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 SLCO1B3Q9NPD5 702 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 ZNF69Q9UC07 566 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 SLC13A4Q9UKG4 626 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 TRRAPQ9Y4A5 3859 aa8.44□□□□□ -1.06
LIG1-209ENST00000596104 TMEM120BA0PK00 339 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 RNF13O43567 381 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 MGRN1O60291 552 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 FOXH1O75593 365 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 SERPINB7O75635 380 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 IGHG1P01857 330 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 ASAH2BP0C7U1 165 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 DRD4P21917 467 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 SLC6A2P23975 617 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 APLNRP35414 380 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 MPV17P39210 176 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 PCBP3P57721 371 aaKnown RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 PLP2Q04941 152 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 SLC3A1Q07837 685 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 HNRNPA0Q13151 305 aaKnown RBP8.43□□□□□ -1.06
LIG1-209ENST00000596104 DUSP7Q16829 419 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 SPRNQ5BIV9 151 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 PABPC1L2AQ5JQF8 200 aa8.43□□□□□ -1.06
LIG1-209ENST00000596104 CEP85LQ5SZL2 805 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms