RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 M0R3H8 397 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC22A2O15244 555 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 KRT34O76011 436 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 GPANK1O95872 356 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 CLPTM1O96005 669 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 PNMTP11086 282 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 CD79AP11912 226 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 CD247P20963 164 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 RPS5P46782 204 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 CRYBA2P53672 197 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 CLDN17P56750 224 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 HNRNPA0Q13151 305 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 OR1Q1Q15612 314 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 FXNQ16595 210 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 ARMCX4Q5H9R4 360 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 INTS11Q5TA45 600 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 FAM91A1Q658Y4 838 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 ULK3Q6PHR2 472 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 C17orf107Q6ZR85 190 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 PATL1Q86TB9 770 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 RANBP3LQ86VV4 465 aaPredicted RBP11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 CALHM3Q86XJ0 350 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 TREML1Q86YW5 311 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 DEFB108BQ8NET1 73 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 MFSD8Q8NHS3 518 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 TAMM41Q96BW9 452 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 SH3GL1Q99961 368 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 RBM4BQ9BQ04 359 aaKnown RBP11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 PIF1Q9H611 641 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 TENM3Q9P273 2699 aa11.67□□□□□ -0.54
SHKBP1-208ENST00000595726 IGHV3OR16-10A0A075B7F0 116 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 IGHV1-69-2A0A0G2JMI3 117 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 RPL36A-HNRNPH2H7BZ11 118 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 M0QZ24 198 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 ZNF432O94892 652 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 VAMP5O95183 116 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 ZNF14P17017 642 aaPredicted RBP11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 CRYBB2P43320 205 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 NPTX1Q15818 432 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 NKPD1Q17RQ9 610 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 FAM69AQ5T7M9 428 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 C5orf46Q6UWT4 87 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 CCDC80Q76M96 950 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 POU5F2Q8N7G0 328 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 PCYOX1LQ8NBM8 494 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 OR4D11Q8NGI4 311 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 OR6T1Q8NGN1 323 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 GTF3AQ92664 365 aaKnown RBP11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC38A4Q969I6 547 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 UBE2FQ969M7 185 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC25A36Q96CQ1 311 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 RCN3Q96D15 328 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC47A1Q96FL8 570 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 ZNF75AQ96N20 296 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 CITED1Q99966 193 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 GAL3ST1Q99999 423 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 ECSITQ9BQ95 431 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 TMEM27Q9HBJ8 222 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 GID8Q9NWU2 228 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 UBAP1Q9NZ09 502 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 SEC14L4Q9UDX3 406 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 MMP24Q9Y5R2 645 aa11.66□□□□□ -0.54
SHKBP1-208ENST00000595726 A0A087WUJ7 227 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 MDFIC2A0A1B0GVS7 189 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 C17orf100A8MU93 164 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 CLDN34H7C241 214 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 FMO6PO60774 539 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 GTF2E2P29084 291 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 RBMXP38159 391 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 CDH12P55289 794 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 SWT1Q5T5J6 900 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 ASPHD2Q6ICH7 369 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 USP51Q70EK9 711 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 GPR137CQ8N3F9 429 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 RP9Q8TA86 221 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 VANGL1Q8TAA9 524 aaPredicted RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 SLC26A7Q8TE54 656 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 RASSF5Q8WWW0 418 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 POP5Q969H6 163 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 TAAR8Q969N4 342 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 ZNF583Q96ND8 569 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 MCHR1Q99705 422 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 HINT3Q9NQE9 182 aaKnown RBP11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 TNFRSF19Q9NS68 423 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 SELENONQ9NZV5 590 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 AUP1Q9Y679 476 aa11.65□□□□□ -0.54
SHKBP1-208ENST00000595726 COL7A1Q02388 2944 aa11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 TRAV36DV7A0A075B6V5 113 aa11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 FAM220BPB1ANY3 271 aa11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 CLDN25C9JDP6 229 aa11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 TRAPPC2LH3BP13 241 aa11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 M0R082 166 aa11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 TPD52L2O43399 206 aaKnown RBP11.64□□□□□ -0.55
SHKBP1-208ENST00000595726 CHP2O43745 196 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms