RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CTDSPLO15194 276 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF264O43296 627 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 TIAF1O95411 115 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SEC61A1P61619 476 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ELOA3BQ3SY89 546 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SFXN4Q6P4A7 337 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF322Q6U7Q0 402 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 Q6ZTK2 550 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF440Q8IYI8 595 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 C10orf53Q8N6V4 93 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 ELOA3Q8NG57 546 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 OR14A16Q8NHC5 309 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 CHIAQ9BZP6 476 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC25A32Q9H2D1 315 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC22A11Q9NSA0 550 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 BABAM2Q9NXR7 383 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 MRTO4Q9UKD2 239 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 IER3IP1Q9Y5U9 82 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 U3KQA8 63 aa15.48■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC22A31A6NKX4 558 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 RNF13O43567 381 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 KDM4BO94953 1096 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 NDUFB2O95178 105 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 HIST1H1CP16403 213 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 DEFA5Q01523 94 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 WBP2NLQ6ICG8 309 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 ARHGAP11AQ6P4F7 1023 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 IL20RBQ6UXL0 311 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 OR6V1Q8N148 313 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 OR51L1Q8NGJ5 315 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 TRMT10AQ8TBZ6 339 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 ALG8Q9BVK2 526 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 WWTR1Q9GZV5 400 aa15.47■□□□□ 0.07
SHKBP1-205ENST00000594973 IGKV1D-42A0A075B6H8 117 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 DAPL1A0PJW8 107 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 MT-ND4P03905 459 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 HIST1H2ABP04908 130 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 ANKRD34CP0C6C1 535 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 IFNGR1P15260 489 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 DGCR2P98153 550 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 PLCXD2Q0VAA5 305 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 MICBQ29980 383 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 COX15Q7KZN9 410 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 HIST3H2AQ7L7L0 130 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 TMEM17Q86X19 198 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 EID2Q8N6I1 236 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 OR1M1Q8NGA1 313 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 OR1N1Q8NGS0 311 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 ZNF563Q8TA94 476 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC22A8Q8TCC7 542 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 STT3BQ8TCJ2 826 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 HIST1H2ACQ93077 130 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 CYB5R1Q9UHQ9 305 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 NAP1L6A6NFF2 107 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 HCRTR2O43614 444 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 IFNGP01579 166 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 MST1P26927 711 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 MAPK3P27361 379 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 ELFN2Q5R3F8 820 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 POMZP3Q6PJE2 187 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 GSG1LQ6UXU4 331 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 SLC29A4Q7RTT9 530 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 MARCH3Q86UD3 253 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 OR11G2Q8NGC1 345 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 INTS12Q96CB8 462 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 DNAJA3Q96EY1 480 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 KLHL1Q9NR64 748 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 ICAM5Q9UMF0 924 aa15.46■□□□□ 0.07
SHKBP1-205ENST00000594973 CCDC163A0A0D9SF12 145 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 A0A1B0GVC2 190 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 A6NIN4 97 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 BLOC1S5-TXNDC5H3BN57 136 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 SC5DO75845 299 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 CD53P19397 219 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 PSMB1P20618 241 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 ADH7P40394 386 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 RHBDD2Q6NTF9 364 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 EDAQ92838 391 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 ORAI1Q96D31 301 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 CHRNA9Q9UGM1 479 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 SUSD2Q9UGT4 822 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 GPN3Q9UHW5 284 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 CAMK2AQ9UQM7 478 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 IGHV5-10-1A0A0J9YXX1 117 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 LINC00587B1AMM8 73 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 ITPKBP27987 946 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 PSMA6P60900 246 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 MC2RQ01718 297 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 ZNF117Q03924 483 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 CCDC157Q569K6 752 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 YOD1Q5VVQ6 348 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 PWWP2BQ6NUJ5 590 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 GLDNQ6ZMI3 551 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 ATG4DQ86TL0 474 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 DMRTA2Q96SC8 542 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 TIMP4Q99727 224 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 TTTY10Q9BZA0 68 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 SEMA4CQ9C0C4 833 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 BEX1Q9HBH7 125 aa15.45■□□□□ 0.06
SHKBP1-205ENST00000594973 FBXL3Q9UKT7 428 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms