RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SORDQ00796 357 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 GUCA2AQ02747 115 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 RPL18Q07020 188 aaKnown RBP11.99□□□□□ -0.49
VRK3-209ENST00000594948 SKP2Q13309 424 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 GRM7Q14831 915 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 ALG11Q2TAA5 492 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 PRTGQ2VWP7 1150 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 C2orf76Q3KRA6 126 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 TMEM196Q5HYL7 178 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 WDR38Q5JTN6 314 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 TMEM240Q5SV17 173 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 C11orf88Q6PI97 169 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 TMEM205Q6UW68 189 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 TMEM184AQ6ZMB5 413 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 C10orf53Q8N6V4 93 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 OR10AC1Q8NH08 325 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 C16orf52Q8NHV5 167 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 OTOSQ8NHW6 89 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 ST8SIA2Q92186 375 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 ELSPBP1Q96BH3 223 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 LPAR4Q99677 370 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 EDEM2Q9BV94 578 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 OR10A5Q9H207 317 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 SEMA6CQ9H3T2 930 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 PRTFDC1Q9NRG1 225 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 UBQLN4Q9NRR5 601 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 COL5A1P20908 1838 aaPredicted RBP11.99□□□□□ -0.49
VRK3-209ENST00000594948 CPAMD8Q8IZJ3 1885 aa11.99□□□□□ -0.49
VRK3-209ENST00000594948 KIR2DS5A0A0G2JLQ3 304 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 A0A0G2JNG1 304 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 TMEM82A0PJX8 343 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 TMEM200CA6NKL6 621 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 KIR2DS3K7RE56 304 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 HRKO00198 91 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 LGALS8O00214 317 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 DCTN6O00399 190 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 CLDN4O14493 209 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 DOK2O60496 412 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 OR2F2O95006 317 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 CD74P04233 296 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 PROS1P07225 676 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 ITGA5P08648 1049 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 OC90Q02509 493 aaPredicted RBP11.98□□□□□ -0.49
VRK3-209ENST00000594948 BIKQ13323 160 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 OR2F1Q13607 317 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 SLC17A1Q14916 467 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 KIR2DS5Q14953 304 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 TEX30Q5JUR7 227 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 LY6G6FQ5SQ64 297 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 CFAP77Q6ZQR2 320 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 MOB3CQ70IA8 216 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 SPRED2Q7Z698 418 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 BIVMQ86UB2 503 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 TMEM17Q86X19 198 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 ZNF615Q8N8J6 731 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 OR5M8Q8NGP6 311 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 RNF128Q8TEB7 428 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 TSEN15Q8WW01 171 aaKnown RBP11.98□□□□□ -0.49
VRK3-209ENST00000594948 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 SLC25A28Q96A46 364 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 SLC38A3Q99624 504 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 SLC6A17Q9H1V8 727 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 POFUT1Q9H488 388 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 IFT46Q9NQC8 304 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 GPN3Q9UHW5 284 aaPredicted RBP11.98□□□□□ -0.49
VRK3-209ENST00000594948 FBXL2Q9UKC9 423 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 ZNF346Q9UL40 294 aaKnown RBP11.98□□□□□ -0.49
VRK3-209ENST00000594948 ATG2BQ96BY7 2078 aa11.98□□□□□ -0.49
VRK3-209ENST00000594948 A0A1B0GTH9 108 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 TCRBV16S1A1N1A0A5B0 115 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 C4orf47A7E2U8 309 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 CHURC1-FNTBB4DL54 471 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 H0YC42 278 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ABCD4O14678 606 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 RAB3DO95716 219 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 RLN2P04090 185 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 HLA-GP17693 338 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 PGDP52209 483 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 EGR4Q05215 589 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 COL13A1Q5TAT6 717 aaPredicted RBP11.97□□□□□ -0.49
VRK3-209ENST00000594948 GLT8D1Q68CQ7 371 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 DPY19L4Q7Z388 723 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ZNF546Q86UE3 836 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 OR51A4Q8NGJ6 313 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 GPBAR1Q8TDU6 330 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 PTX4Q96A99 478 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 SEH1LQ96EE3 360 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 MS4A7Q9GZW8 240 aaPredicted RBP11.97□□□□□ -0.49
VRK3-209ENST00000594948 CLDN16Q9Y5I7 305 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 HRH3Q9Y5N1 445 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 A0A1W2PQF6 199 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 MEGF11A6BM72 1044 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 H0Y8X5 98 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 ZNF264O43296 627 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 KDM4BO94953 1096 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 SPDEFO95238 335 aa11.97□□□□□ -0.49
VRK3-209ENST00000594948 IL33O95760 270 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms