RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 OR6F1Q8NGZ6 308 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 OR6S1Q8NH40 331 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 SPOCK3Q9BQ16 436 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 OR51E2Q9H255 320 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 C12orf49Q9H741 205 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 ENOPH1Q9UHY7 261 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 ZNF221Q9UK13 617 aa17.41■□□□□ 0.38
LSM4-203ENST00000593829 EFCAB10A6NFE3 127 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 AQP7P3A6NL99 342 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 GPR171O14626 319 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 RAMP1O60894 148 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 IGFBP2P18065 325 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 NR4A2P43354 598 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 SLC16A1P53985 500 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 RSBN1Q5VWQ0 802 aaPredicted RBP17.4■□□□□ 0.38
LSM4-203ENST00000593829 NUFIP2Q7Z417 695 aaKnown RBP17.4■□□□□ 0.38
LSM4-203ENST00000593829 ACBD4Q8NC06 268 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 OR10G2Q8NGC3 310 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 ZNF775Q96BV0 537 aaPredicted RBP17.4■□□□□ 0.38
LSM4-203ENST00000593829 PRRC1Q96M27 445 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 FEVQ99581 238 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 SDHCQ99643 169 aaPredicted RBP17.4■□□□□ 0.38
LSM4-203ENST00000593829 NDUFAF4Q9P032 175 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 HCFC1P51610 2035 aa17.4■□□□□ 0.38
LSM4-203ENST00000593829 PTHP01270 115 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 COX6B1P14854 86 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 PTNP21246 168 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 MFSD13AQ14CX5 517 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 ZNF474Q6S9Z5 364 aaPredicted RBP17.39■□□□□ 0.37
LSM4-203ENST00000593829 MEX3BQ6ZN04 569 aaKnown RBP17.39■□□□□ 0.37
LSM4-203ENST00000593829 KIF18BQ86Y91 864 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 PRSS27Q9BQR3 290 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 CENPOQ9BU64 300 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 ZNF426Q9BUY5 554 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 RACGAP1Q9H0H5 632 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 A4GNTQ9UNA3 340 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 NOX1Q9Y5S8 564 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 ADGRG4Q8IZF6 3080 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 IDH3BO43837 385 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 MPZL2O60487 215 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 FZD7O75084 574 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 SLC15A1P46059 708 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 ST3GAL3Q11203 375 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 MICAQ29983 383 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 TMEM225Q6GV28 225 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 SF3B5Q9BWJ5 86 aaKnown RBP17.39■□□□□ 0.37
LSM4-203ENST00000593829 SLC19A3Q9BZV2 496 aa17.39■□□□□ 0.37
LSM4-203ENST00000593829 FLNBO75369 2602 aaKnown RBP17.38■□□□□ 0.37
LSM4-203ENST00000593829 LOC100506127A0A0U1RQW1 187 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 VAMP5O95183 116 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 PIPP12273 146 aaPredicted RBP17.38■□□□□ 0.37
LSM4-203ENST00000593829 DDOSTP39656 456 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 P2RY4P51582 365 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 ST3GAL4Q11206 333 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 SLC17A1Q14916 467 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 GDPGP1Q6ZNW5 385 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 DMRTC2Q8IXT2 367 aaPredicted RBP17.38■□□□□ 0.37
LSM4-203ENST00000593829 C10orf53Q8N6V4 93 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 SLC30A2Q9BRI3 323 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 ELOVL5Q9NYP7 299 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 MPDZO75970 2070 aa17.38■□□□□ 0.37
LSM4-203ENST00000593829 ARRDC5A6NEK1 342 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 BGLAPP02818 100 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 GRPRP30550 384 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 RBM34P42696 430 aaKnown RBP17.37■□□□□ 0.37
LSM4-203ENST00000593829 GPR50Q13585 617 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 CARTPTQ16568 116 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 GPAT4Q86UL3 456 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 NKAIN4Q8IVV8 208 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 CELF2-AS1Q8N7Q2 184 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 HS6ST2Q96MM7 605 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 Q96MT0 163 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 CHCHD6Q9BRQ6 235 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 FNDC11Q9BVV2 318 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 RASD1Q9Y272 281 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 B3GALT5Q9Y2C3 310 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 NOSIPQ9Y314 301 aaKnown RBP17.37■□□□□ 0.37
LSM4-203ENST00000593829 N6AMT1Q9Y5N5 214 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 ENPP4Q9Y6X5 453 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 SLC35F4A4IF30 521 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 J3KTA2 159 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 CCRL2O00421 344 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 MT-ATP6P00846 226 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 ITGA2P17301 1181 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 CBLP22681 906 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 CD79BP40259 229 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 HMGA2P52926 109 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 SORDQ00796 357 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 EXOC3L2Q2M3D2 409 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 ZNF787Q6DD87 383 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 TFAP2EQ6VUC0 442 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 BEND4Q6ZU67 534 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 H1FNTQ75WM6 255 aaPredicted RBP17.37■□□□□ 0.37
LSM4-203ENST00000593829 ZNF417Q8TAU3 575 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 WDFY2Q96P53 400 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 ZNF587Q96SQ5 575 aaPredicted RBP17.37■□□□□ 0.37
LSM4-203ENST00000593829 ASPNQ9BXN1 380 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 FANCFQ9NPI8 374 aa17.37■□□□□ 0.37
LSM4-203ENST00000593829 ANKRD34BA5PLL1 514 aa17.36■□□□□ 0.37
LSM4-203ENST00000593829 POU2F1P14859 743 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms