RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 DPPA2Q7Z7J5 298 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 NKAIN4Q8IVV8 208 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 LRRC18Q8N456 261 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 SYT14Q8NB59 555 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 RBM15BQ8NDT2 890 aaKnown RBP17.51■□□□□ 0.39
TRIM47-207ENST00000593089 SNX33Q8WV41 574 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 RASSF5Q8WWW0 418 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 TMEM186Q96B77 213 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 ZNF416Q9BWM5 594 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 METTL17Q9H7H0 456 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-207ENST00000593089 GPR160Q9UJ42 338 aa17.51■□□□□ 0.39
TRIM47-207ENST00000593089 A0A0G2JND7 137 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 IQCMA0A1B0GVH7 501 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 C17orf100A8MU93 164 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 CDC14BO60729 498 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 RP2O75695 350 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 PTHP01270 115 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 MT-ND1P03886 318 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 MSMBP08118 114 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 GAAP10253 952 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 FUT1P19526 365 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 UGT2B15P54855 530 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 TAS2R41P59536 307 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 CCL8P80075 99 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 MRPS11P82912 194 aaKnown RBP17.5■□□□□ 0.39
TRIM47-207ENST00000593089 PLP2Q04941 152 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 HIST3H3Q16695 136 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 NANOGP8Q6NSW7 305 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 TMEM154Q6P9G4 183 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 DEF8Q6ZN54 512 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 CCDC80Q76M96 950 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 OR1J2Q8NGS2 313 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 TMEM255BQ8WV15 326 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 ASB10Q8WXI3 467 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 C11orf40Q8WZ69 217 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 NANOGQ9H9S0 305 aa17.5■□□□□ 0.39
TRIM47-207ENST00000593089 HINT3Q9NQE9 182 aaKnown RBP17.5■□□□□ 0.39
TRIM47-207ENST00000593089 IGLV3-9A0A075B6K5 115 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 FBP2O00757 339 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 SHOX2O60902 331 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-207ENST00000593089 TRMUO75648 421 aaKnown RBP17.49■□□□□ 0.39
TRIM47-207ENST00000593089 OR7A10O76100 309 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 SNAP29O95721 258 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 ZNF250P15622 560 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 ACADSP16219 412 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 AQP2P41181 271 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 RAD52P43351 418 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 UCP2P55851 309 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 NRN1LQ496H8 165 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 RABL3Q5HYI8 236 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 OR51F2Q8NH61 342 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 ZNF519Q8TB69 540 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 SGTBQ96EQ0 304 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 LRRC37BQ96QE4 947 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 MRPL13Q9BYD1 178 aaKnown RBP17.49■□□□□ 0.39
TRIM47-207ENST00000593089 LRMDAQ9H2I8 198 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 INIPQ9NRY2 104 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 SLCO1C1Q9NYB5 712 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 GRIP1Q9Y3R0 1128 aa17.49■□□□□ 0.39
TRIM47-207ENST00000593089 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 EDF1O60869 148 aaKnown RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 SLC2A10O95528 541 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 CCNOP22674 350 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 APLNRP35414 380 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 DAP3P51398 398 aaKnown RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 LMO4P61968 165 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 HSF2Q03933 536 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 GLO1Q04760 184 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 CYLC2Q14093 348 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 AVPI1Q5T686 147 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 SHQ1Q6PI26 577 aaKnown RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 MOSPD2Q8NHP6 518 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 GTF3AQ92664 365 aaKnown RBP17.48■□□□□ 0.39
TRIM47-207ENST00000593089 SEPHS2Q99611 448 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 BCL2L14Q9BZR8 327 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 KCNN2Q9H2S1 579 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 C20orf141Q9NUB4 165 aa17.48■□□□□ 0.39
TRIM47-207ENST00000593089 MMP7P09237 267 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-207ENST00000593089 CDAP32320 146 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 RBM34P42696 430 aaKnown RBP17.47■□□□□ 0.39
TRIM47-207ENST00000593089 MVKQ03426 396 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 PIN1Q13526 163 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-207ENST00000593089 PCGF3Q3KNV8 242 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 PABPC1L2AQ5JQF8 200 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 THSD4Q6ZMP0 1018 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 HDDC2Q7Z4H3 204 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 OR1J1Q8NGS3 322 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 TMEM239Q8WW34 195 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 ECSITQ9BQ95 431 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 CCNB1IP1Q9NPC3 277 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 RIMS3Q9UJD0 308 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 BAG5Q9UL15 447 aa17.47■□□□□ 0.39
TRIM47-207ENST00000593089 CENPBD1B2RD01 187 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 TPD52L2O43399 206 aaKnown RBP17.46■□□□□ 0.39
TRIM47-207ENST00000593089 OR5F1O95221 314 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 VENTXO95231 258 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 DRD4P21917 467 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 OR1E2P47887 323 aa17.46■□□□□ 0.39
TRIM47-207ENST00000593089 FMODQ06828 376 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms