RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NPIPB4C9JG80 1138 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 TLX2O43763 284 aaPredicted RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 ENTPD5O75356 428 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 CRLF1O75462 422 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 SERPINA5P05154 406 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 SAGP10523 405 aaPredicted RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 GLRXP35754 106 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 GALK2Q01415 458 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 CARTPTQ16568 116 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 FXNQ16595 210 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 C10orf128Q5T292 105 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 TBPL2Q6SJ96 375 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 SLC16A14Q7RTX9 510 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 TSEN54Q7Z6J9 526 aaKnown RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 CPLX4Q7Z7G2 160 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 LRRC75AQ8NAA5 344 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 OR13C2Q8NGS9 318 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 OR51A7Q8NH64 312 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 ACOT11Q8WXI4 607 aaPredicted RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 MRPL24Q96A35 216 aaKnown RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 KCNK17Q96T54 332 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 MRPL37Q9BZE1 423 aaKnown RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 MYOZ1Q9NP98 299 aaPredicted RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 SPAG4Q9NPE6 437 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 EGFL7Q9UHF1 273 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 ZNF346Q9UL40 294 aaKnown RBP11.96□□□□□ -0.49
APOC1-208ENST00000592535 SPEF1Q9Y4P9 236 aa11.96□□□□□ -0.49
APOC1-208ENST00000592535 RTTNQ86VV8 2226 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
APOC1-208ENST00000592535 GMNCA6NCL1 334 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 NDUFS8O00217 210 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 IGHMP01871 453 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 ADRA2AP08913 450 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 CCL2P13500 99 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 USF1P22415 310 aaPredicted RBP11.95□□□□□ -0.5
APOC1-208ENST00000592535 CDAP32320 146 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 NR4A2P43354 598 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 CTXN1P60606 82 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 RPL27P61353 136 aaKnown RBP11.95□□□□□ -0.5
APOC1-208ENST00000592535 VLDLRP98155 873 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 CD47Q08722 323 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 FHL1Q13642 323 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 GGTLC2Q14390 218 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 SLC36A2Q495M3 483 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 GLYATQ6IB77 296 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 TMEM53Q6P2H8 277 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 ZNF730Q6ZMV8 503 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 DPPA2Q7Z7J5 298 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 LRRC18Q8N456 261 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 PAQR4Q8N4S7 273 aaPredicted RBP11.95□□□□□ -0.5
APOC1-208ENST00000592535 RNF148Q8N7C7 305 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 CLDN22Q8N7P3 220 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 SLC30A7Q8NEW0 376 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 NEU4Q8WWR8 484 aaPredicted RBP11.95□□□□□ -0.5
APOC1-208ENST00000592535 NSMAFQ92636 917 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 FOXN4Q96NZ1 517 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 ADA2Q9NZK5 511 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 SLC7A8Q9UHI5 535 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 FZR1Q9UM11 496 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 UGT2A1Q9Y4X1 527 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 ENPP4Q9Y6X5 453 aa11.95□□□□□ -0.5
APOC1-208ENST00000592535 MALRD1Q5VYJ5 2156 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 KIAA1324LA8MWY0 1029 aaPredicted RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 CDC42EP2O14613 210 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 MMP7P09237 267 aaPredicted RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 FAM157BP0CG42 384 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 IGHV4-31P0DP07 118 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 DAOP14920 347 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 GPR4P46093 362 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 RPS23P62266 143 aaKnown RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 GNGT1P63211 74 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 MRPS34P82930 218 aaKnown RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 TAF11Q15544 211 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 C6orf52Q5T4I8 152 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 MBOAT2Q6ZWT7 520 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 OAFQ86UD1 273 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 LRP11Q86VZ4 500 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 CYP4Z1Q86W10 505 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 RNF113BQ8IZP6 322 aaKnown RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 FAM86B1Q8N7N1 296 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 FAM156AQ8NDB6 213 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 ZNF519Q8TB69 540 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 NABP1Q96AH0 204 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 TSPAN32Q96QS1 320 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 ALG12Q9BV10 488 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 TPK1Q9H3S4 243 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 NMNAT1Q9HAN9 279 aaPredicted RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 SMURF2Q9HAU4 748 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 MYEF2Q9P2K5 600 aaKnown RBP11.94□□□□□ -0.5
APOC1-208ENST00000592535 RPS6KA6Q9UK32 745 aa11.94□□□□□ -0.5
APOC1-208ENST00000592535 JMJD1CQ15652 2540 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms