RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 DNAJA3Q96EY1 480 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 ARL5BQ96KC2 179 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 OR5B2Q96R09 309 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 OR52B2Q96RD2 323 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 OR52E6Q96RD3 313 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 PANX1Q96RD7 426 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 ZNF300Q96RE9 604 aaPredicted RBP6.59□□□□□ -1.35
VMP1-213ENST00000591877 SMR3AQ99954 134 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 TMEM204Q9BSN7 226 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 TEX12Q9BXU0 123 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 ACTR6Q9GZN1 396 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 OR10A4Q9H209 315 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 UBTD1Q9HAC8 227 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 TIGARQ9NQ88 270 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 CTPS2Q9NRF8 586 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 CADP27708 2225 aa6.59□□□□□ -1.35
VMP1-213ENST00000591877 TRPC5OSA6NMA1 111 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 ZNF716A6NP11 495 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 HNRNPCL1O60812 293 aaKnown RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 RAMP1O60894 148 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 SHOX2O60902 331 aaPredicted RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 SLC22A3O75751 556 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 MAKP20794 623 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 RPS4Y1P22090 263 aaKnown RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 RYKP34925 604 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 CHI3L1P36222 383 aaPredicted RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 APOBEC1P41238 236 aaKnown RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 OR3A2P47893 321 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 RASGEF1BQ0VAM2 473 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 TAB1Q15750 504 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 GTDC1Q4AE62 458 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 SYT14P1Q58G82 188 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 BEX5Q5H9J7 111 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 HMBOX1Q6NT76 420 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 LRRC74BQ6ZQY2 392 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 LRRC75A-AS1Q8N1F1 130 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 SLC43A2Q8N370 569 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 OR9I1Q8NGQ6 314 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 WIPF2Q8TF74 440 aaPredicted RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 TMEM234Q8WY98 164 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 TRNT1Q96Q11 434 aaKnown RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 OR11A1Q9GZK7 315 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 EXOSC3Q9NQT5 275 aaKnown RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 SDR39U1Q9NRG7 319 aaPredicted RBP6.58□□□□□ -1.36
VMP1-213ENST00000591877 SLC35A3Q9Y2D2 325 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 PCDHGB5Q9Y5G0 923 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 SESN1Q9Y6P5 492 aa6.58□□□□□ -1.36
VMP1-213ENST00000591877 USF3Q68DE3 2245 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 DSPPQ9NZW4 1301 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 A0A1W2PQ09 198 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 TMEM72A0PK05 275 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 CBY3A6NI87 242 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ZNF724A8MTY0 619 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 USP17L23D6RBM5 183 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 SLCO1B7G3V0H7 640 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 SULT2B1O00204 365 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 KLF11O14901 512 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 LCKP06239 509 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 TFPTP0C1Z6 253 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ZCCHC18P0CG32 403 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ETFAP13804 333 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 IDO1P14902 403 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 IGHV1-2P23083 117 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 TACR3P29371 465 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 CDAP32320 146 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ACAA2P42765 397 aaKnown RBP6.57□□□□□ -1.36
VMP1-213ENST00000591877 IDH2P48735 452 aaKnown RBP6.57□□□□□ -1.36
VMP1-213ENST00000591877 H3F3AP84243 136 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 FOXI1Q12951 378 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ITGADQ13349 1161 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 NCMAPQ5T1S8 102 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 SHEQ5VZ18 495 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 EPGNQ6UW88 154 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ZNF704Q6ZNC4 412 aaPredicted RBP6.57□□□□□ -1.36
VMP1-213ENST00000591877 Q6ZT83 130 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 GRINAQ7Z429 371 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 CIARTQ8N365 385 aaPredicted RBP6.57□□□□□ -1.36
VMP1-213ENST00000591877 TRIML2Q8N7C3 387 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 STEAP2Q8NFT2 490 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 ZNF563Q8TA94 476 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 SGCDQ92629 289 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 PIGTQ969N2 578 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 VPS33AQ96AX1 596 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 AURKBQ96GD4 344 aaPredicted RBP6.57□□□□□ -1.36
VMP1-213ENST00000591877 C18orf12Q96KH6 178 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 CCL19Q99731 98 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 RSPO3Q9BXY4 272 aaPredicted RBP6.57□□□□□ -1.36
VMP1-213ENST00000591877 SERINC1Q9NRX5 453 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 KLHL9Q9P2J3 617 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 CHRNA9Q9UGM1 479 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 OSGIN1Q9UJX0 560 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 LIPT1Q9Y234 373 aa6.57□□□□□ -1.36
VMP1-213ENST00000591877 NAV3Q8IVL0 2385 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 IGKV3D-15A0A087WSY6 115 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 TMED7-TICAM2A0A0A6YYA0 188 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 DPRXA6NFQ7 191 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 FAAHO00519 579 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 RFXANKO14593 260 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 RRHO14718 337 aa6.56□□□□□ -1.36
VMP1-213ENST00000591877 HS3ST1O14792 307 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms