RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 FOXG1P55316 489 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-226ENST00000591534 SELENOWP63302 87 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 EPS8Q12929 822 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 TAF11Q15544 211 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 SYPL1Q16563 259 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 MST1LQ2TV78 715 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 TBRG1Q3YBR2 411 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 LIN52Q52LA3 116 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 HIKESHIQ53FT3 197 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 WBP2NLQ6ICG8 309 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 ANKRD16Q6P6B7 361 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 CBLL1Q75N03 491 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 MSRB3Q8IXL7 192 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 CCDC36Q8IYA8 594 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 SVOPLQ8N434 492 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 PACRGLQ8N7B6 248 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 ANKFN1Q8N957 763 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 PAPD5Q8NDF8 572 aaKnown RBP8.2□□□□□ -1.1
BRCA1-226ENST00000591534 PIK3C3Q8NEB9 887 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 OR1K1Q8NGR3 316 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 DNAJC9Q8WXX5 260 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 NRBF2Q96F24 287 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 FOXN4Q96NZ1 517 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 SORCS2Q96PQ0 1159 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 AURKCQ9UQB9 309 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 ORC6Q9Y5N6 252 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
BRCA1-226ENST00000591534 IGHV1-18A0A0C4DH31 117 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 H0YJX3 145 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 AP3D1O14617 1153 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 AKAP8O43823 692 aaKnown RBP8.19□□□□□ -1.1
BRCA1-226ENST00000591534 ENTPD5O75356 428 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 LY6HO94772 140 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF205O95201 554 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 IFNW1P05000 195 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 CHRM4P08173 479 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 TFPTP0C1Z6 253 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 ETFAP13804 333 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 DAOP14920 347 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 NPR2P20594 1047 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 IFNGR2P38484 337 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 PCBP3P57721 371 aaKnown RBP8.19□□□□□ -1.1
BRCA1-226ENST00000591534 RCN1Q15293 331 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 RFX4Q33E94 735 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 IFI44LQ53G44 452 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 MRPL2Q5T653 305 aaKnown RBP8.19□□□□□ -1.1
BRCA1-226ENST00000591534 CREB3L2Q70SY1 520 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 PIWIL3Q7Z3Z3 882 aaKnown RBP8.19□□□□□ -1.1
BRCA1-226ENST00000591534 C10orf111Q8N326 155 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 CADM2Q8N3J6 435 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 RNF148Q8N7C7 305 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 ARIH2OSQ8N7S6 290 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 TMEM99Q8N816 258 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 NUP37Q8NFH4 326 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 SLC38A5Q8WUX1 472 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 SLC47A1Q96FL8 570 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 CENPNQ96H22 339 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF385AQ96PM9 386 aaKnown RBP8.19□□□□□ -1.1
BRCA1-226ENST00000591534 C9orf16Q9BUW7 83 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 LINC00470Q9BZP3 86 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 SLC38A1Q9H2H9 487 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 PLK3Q9H4B4 646 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF442Q9H7R0 627 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 DYNLRB1Q9NP97 96 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 IL1RAPQ9NPH3 570 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 DNAJB9Q9UBS3 223 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 SPEF1Q9Y4P9 236 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 CADP27708 2225 aa8.19□□□□□ -1.1
BRCA1-226ENST00000591534 PRR14LQ5THK1 2151 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 IGHV4-61A0A0C4DH41 118 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 CDHR4A6H8M9 788 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 ANKRD65E5RJM6 399 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 OR2T1O43869 369 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 SLC43A1O75387 559 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 AHSA1O95433 338 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF682O95780 498 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 BAG2O95816 211 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 LGI1O95970 557 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 SERPINA1P01009 418 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 FABP3P05413 133 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 BCHEP06276 602 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 CBR1P16152 277 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 ZNF43P17038 809 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 RPS4Y1P22090 263 aaKnown RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 GIFP27352 417 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 ARR3P36575 388 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 VHLP40337 213 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 GZMMP51124 257 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 NAAAQ02083 359 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 C1DQ13901 141 aaKnown RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 ADIPOQQ15848 244 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 CR1LQ2VPA4 569 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 LRRC23Q53EV4 343 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 C1orf140Q5VVS0 124 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 NIPAL3Q6P499 406 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 C5orf46Q6UWT4 87 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 RANBP3LQ86VV4 465 aaPredicted RBP8.18□□□□□ -1.1
BRCA1-226ENST00000591534 PQLC1Q8N2U9 271 aa8.18□□□□□ -1.1
BRCA1-226ENST00000591534 GPR137CQ8N3F9 429 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms