RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 B3GNT2Q9NY97 397 aa10.37□□□□□ -0.75
LIG3-213ENST00000590630 POU2F3Q9UKI9 436 aa10.37□□□□□ -0.75
LIG3-213ENST00000590630 ITGB1BP2Q9UKP3 347 aa10.37□□□□□ -0.75
LIG3-213ENST00000590630 ADAM18Q9Y3Q7 739 aa10.37□□□□□ -0.75
LIG3-213ENST00000590630 SAMHD1Q9Y3Z3 626 aaKnown RBP10.37□□□□□ -0.75
LIG3-213ENST00000590630 HIVEP1P15822 2718 aa10.37□□□□□ -0.75
LIG3-213ENST00000590630 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
LIG3-213ENST00000590630 TCRBV3S1A0A5B6 114 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 ZNF503-AS2A6NEH8 195 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CCNB2O95067 398 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 UBL3O95164 117 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 SLC2A10O95528 541 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CST1P01037 141 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 HLA-HP01893 362 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CRYAAP02489 173 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CECR9P0C854 216 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CD79AP11912 226 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 APEHP13798 732 aaKnown RBP10.36□□□□□ -0.75
LIG3-213ENST00000590630 NPR2P20594 1047 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 RPS6KA3P51812 740 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 ART1P52961 327 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 FXYD6P3P58550 94 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 MRPS34P82930 218 aaKnown RBP10.36□□□□□ -0.75
LIG3-213ENST00000590630 MYBPC1Q00872 1141 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 SPOCK1Q08629 439 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 TSPAN31Q12999 210 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 TESK1Q15569 626 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 MICAQ29983 383 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 ZNF770Q6IQ21 691 aaPredicted RBP10.36□□□□□ -0.75
LIG3-213ENST00000590630 RPL13AP3Q6NVV1 102 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 THSD4Q6ZMP0 1018 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 ADCK1Q86TW2 530 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 MDP1Q86V88 176 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 IL17RDQ8NFM7 739 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 NEUROG1Q92886 237 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 Q96M85 177 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CXXC4Q9H2H0 198 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 CISD1Q9NZ45 108 aaKnown RBP10.36□□□□□ -0.75
LIG3-213ENST00000590630 ZNF224Q9NZL3 707 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 FBXL3Q9UKT7 428 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 U3KQV3 271 aa10.36□□□□□ -0.75
LIG3-213ENST00000590630 FLNAP21333 2647 aaKnown RBP10.36□□□□□ -0.75
LIG3-213ENST00000590630 TEX13CA0A0J9YWL9 993 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 PRSS37A4D1T9 235 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 ATP6V1G2-DDX39BF2Z307 99 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 ARHGEF9O43307 516 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 TXNDC12O95881 172 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 SLC6A6P31641 620 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 IDH3GP51553 393 aaPredicted RBP10.35□□□□□ -0.75
LIG3-213ENST00000590630 NAAAQ02083 359 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 GABPB1Q06547 395 aaPredicted RBP10.35□□□□□ -0.75
LIG3-213ENST00000590630 FMODQ06828 376 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 NPRL3Q12980 569 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 KRR1Q13601 381 aaKnown RBP10.35□□□□□ -0.75
LIG3-213ENST00000590630 RFX4Q33E94 735 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 MESTQ5EB52 335 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 SLC25A47Q6Q0C1 308 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 SPNS3Q6ZMD2 512 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 ZNF620Q6ZNG0 422 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 CCDC121Q6ZUS5 278 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 SKA3Q8IX90 412 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 CLDN22Q8N7P3 220 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 PAPD5Q8NDF8 572 aaKnown RBP10.35□□□□□ -0.75
LIG3-213ENST00000590630 OR9Q2Q8NGE9 314 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 SMAP2Q8WU79 429 aaPredicted RBP10.35□□□□□ -0.75
LIG3-213ENST00000590630 TMEM171Q8WVE6 324 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 IGFBPL1Q8WX77 278 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 OR52D1Q9H346 318 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 CXorf56Q9H5V9 222 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 SIAEQ9HAT2 523 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 VNN3Q9NY84 501 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 IL20RAQ9UHF4 553 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 MOKQ9UQ07 419 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 UGT2A1Q9Y4X1 527 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 IER3IP1Q9Y5U9 82 aa10.35□□□□□ -0.75
LIG3-213ENST00000590630 F8P00451 2351 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 RTTNQ86VV8 2226 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 SLC22A23A1A5C7 686 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 ARRDC5A6NEK1 342 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 E7EQL1 145 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 EBAG9O00559 213 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 GNGT2O14610 69 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 IMPA2O14732 288 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 ARPC3O15145 178 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 IDH3BO43837 385 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 SMPD2O60906 423 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 FKBP6O75344 327 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 RAB36O95755 333 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 CELA3BP08861 270 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 DANCRP0C864 163 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 ZNF14P17017 642 aaPredicted RBP10.34□□□□□ -0.75
LIG3-213ENST00000590630 GSTM3P21266 225 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 GUCA1AP43080 201 aaPredicted RBP10.34□□□□□ -0.75
LIG3-213ENST00000590630 GIPRP48546 466 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 PTDSS1P48651 473 aaKnown RBP10.34□□□□□ -0.75
LIG3-213ENST00000590630 RAB1AP62820 205 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 PIGFQ07326 219 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 PGGHGQ32M88 737 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 SLC36A2Q495M3 483 aa10.34□□□□□ -0.75
LIG3-213ENST00000590630 C1orf146Q5VVC0 180 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms