RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 RNF113BQ8IZP6 322 aaKnown RBP9.73□□□□□ -0.85
SMAD4-211ENST00000590499 LRRC75AQ8NAA5 344 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 SLC7A13Q8TCU3 470 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF566Q969W8 418 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 NMD3Q96D46 503 aaKnown RBP9.73□□□□□ -0.85
SMAD4-211ENST00000590499 DHRS1Q96LJ7 313 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF75AQ96N20 296 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 CDRT15Q96T59 188 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 FOXB1Q99853 325 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 FUZQ9BT04 418 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 NMNAT1Q9HAN9 279 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-211ENST00000590499 NOX3Q9HBY0 568 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 INIPQ9NRY2 104 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 FAIMQ9NVQ4 179 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 MAGEL2Q9UJ55 1249 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 SAMD4AQ9UPU9 718 aaKnown RBP9.73□□□□□ -0.85
SMAD4-211ENST00000590499 MOKQ9UQ07 419 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 NAV3Q8IVL0 2385 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 A0A1W2PRG6 482 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 A0A1W2PRQ8 180 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 ARPC2O15144 300 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 IGHG1P01857 330 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 IGHMP01871 453 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 HLA-HP01893 362 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 RHCEP18577 417 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 TCN1P20061 433 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-211ENST00000590499 CALCRP30988 508 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 MSX2P35548 267 aaPredicted RBP9.72□□□□□ -0.85
SMAD4-211ENST00000590499 ARR3P36575 388 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 DGCR6Q14129 220 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 AGAP6Q5VW22 663 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 TBPL2Q6SJ96 375 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 C16orf89Q6UX73 402 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 MBOAT2Q6ZWT7 520 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 MDP1Q86V88 176 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 CYP4Z1Q86W10 505 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 MEX3DQ86XN8 651 aaKnown RBP9.72□□□□□ -0.85
SMAD4-211ENST00000590499 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 MUC15Q8N387 334 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 NOXO1Q8NFA2 376 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 COX4I2Q96KJ9 171 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 DMRTB1Q96MA1 342 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 Q96MF0 132 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 CBLN4Q9NTU7 201 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 TMEM38BQ9NVV0 291 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 NDE1Q9NXR1 346 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 POU2F3Q9UKI9 436 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 POFUT2Q9Y2G5 429 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 ATP23Q9Y6H3 246 aa9.72□□□□□ -0.85
SMAD4-211ENST00000590499 TRAV27A0A087WT01 109 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 IGHV2OR16-5A0A0B4J2B6 119 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 CDC42EP2O14613 210 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 DHHO43323 396 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 NDUFS7O75251 213 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 TRMUO75648 421 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 IGHV4-39P01824 125 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 CRYAAP02489 173 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 H1F0P07305 194 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 QDPRP09417 244 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 T-ENOLP0DO92 83 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ACADSP16219 412 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF14P17017 642 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF26P17031 533 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 LIMS1P48059 325 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 SLC9A3P48764 834 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 FABP6P51161 128 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 DAP3P51398 398 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 IDH3GP51553 393 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 MNAT1P51948 309 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 HGFACQ04756 655 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 TAF11Q15544 211 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ANKDD1AQ495B1 522 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 NRN1LQ496H8 165 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ALG10Q5BKT4 473 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 C10orf128Q5T292 105 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 PODNL1Q6PEZ8 512 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF730Q6ZMV8 503 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 DNM1P46Q6ZS02 220 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 TMPRSS11FQ6ZWK6 438 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 PIWIL3Q7Z3Z3 882 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 HDDC2Q7Z4H3 204 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 FBXL14Q8N1E6 418 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 CIARTQ8N365 385 aaPredicted RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 OR13C2Q8NGS9 318 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 HDAC2Q92769 488 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 MCHR2Q969V1 340 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 PYURFQ96I23 114 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 NSL1Q96IY1 281 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 C18orf12Q96KH6 178 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ZNF347Q96SE7 839 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 TXNIPQ9H3M7 391 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 STX18Q9P2W9 335 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 CR1P17927 2039 aa9.71□□□□□ -0.86
SMAD4-211ENST00000590499 CHD3Q12873 2000 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 FN1P02751 2386 aaKnown RBP9.71□□□□□ -0.86
SMAD4-211ENST00000590499 ABCA1O95477 2261 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 IGKV1D-43A0A0B4J1Z2 117 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 TRBV4-1A0A0J9YWV2 114 aa9.7□□□□□ -0.86
SMAD4-211ENST00000590499 TRIM64A6NGJ6 449 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms