RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 C1orf198Q9H425 327 aa15.66■□□□□ 0.1
CCDC43-204ENST00000588687 SLCO1C1Q9NYB5 712 aa15.66■□□□□ 0.1
CCDC43-204ENST00000588687 CCDC167Q9P0B6 97 aa15.66■□□□□ 0.1
CCDC43-204ENST00000588687 J3QLI3 93 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 SERPINB7O75635 380 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 CH25HO95992 272 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 IGHV3-13P01766 116 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 OPN1SWP03999 348 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 QDPRP09417 244 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ANPEPP15144 967 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 LIMS1P48059 325 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ZNF133P52736 654 aaPredicted RBP15.65■□□□□ 0.1
CCDC43-204ENST00000588687 UCP2P55851 309 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 STX1BP61266 288 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 MAGOHP61326 146 aaKnown RBP15.65■□□□□ 0.1
CCDC43-204ENST00000588687 AWAT1Q58HT5 328 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ENTPD8Q5MY95 495 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 TMEM154Q6P9G4 183 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 DPPA2Q7Z7J5 298 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ADAMTS16Q8TE57 1224 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 SNX33Q8WV41 574 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 RAB39BQ96DA2 213 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 C7orf26Q96N11 449 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ZNF347Q96SE7 839 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 PCDHAC1Q9H158 963 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 CDH20Q9HBT6 801 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ZNF229Q9UJW7 825 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 CORO2BQ9UQ03 480 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 ANGPT4Q9Y264 503 aa15.65■□□□□ 0.1
CCDC43-204ENST00000588687 PRKDCP78527 4128 aaKnown RBP15.65■□□□□ 0.1
CCDC43-204ENST00000588687 CPSF4LA6NMK7 179 aaKnown RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 CLDN25C9JDP6 229 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 POLR3GO15318 223 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 ENTPD5O75356 428 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 FARS2O95363 451 aaKnown RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 LCKP06239 509 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 CD247P20963 164 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 IDH3AP50213 366 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 MMP15P51511 669 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 CRYBA2P53672 197 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 GLO1Q04760 184 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 TBC1D28Q2M2D7 210 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 SLC36A2Q495M3 483 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 TMEM53Q6P2H8 277 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 SLC16A14Q7RTX9 510 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 ZNF101Q8IZC7 436 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 CPEB3Q8NE35 698 aaKnown RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 NOXO1Q8NFA2 376 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 DVL3Q92997 716 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 MCHR2Q969V1 340 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 NMD3Q96D46 503 aaKnown RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 JMJD8Q96S16 334 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 PRSS27Q9BQR3 290 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 SUCNR1Q9BXA5 334 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 BCL2L14Q9BZR8 327 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 SAP30LQ9HAJ7 183 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 MEPEQ9NQ76 525 aaPredicted RBP15.64■□□□□ 0.09
CCDC43-204ENST00000588687 NANSQ9NR45 359 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 GPR160Q9UJ42 338 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 SLC13A4Q9UKG4 626 aa15.64■□□□□ 0.09
CCDC43-204ENST00000588687 KPNA4O00629 521 aaPredicted RBP15.63■□□□□ 0.09
CCDC43-204ENST00000588687 RNF13O43567 381 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 OR6A2O95222 327 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 MAKP20794 623 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 WNT5AP41221 380 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 SELENOVP59797 346 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 SELPLGQ14242 412 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 RUNDC3AQ59EK9 446 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 PRR31Q5SQ13 230 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 C10orf128Q5T292 105 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 RBM15BQ8NDT2 890 aaKnown RBP15.63■□□□□ 0.09
CCDC43-204ENST00000588687 C11orf40Q8WZ69 217 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 NABP1Q96AH0 204 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 SLC19A3Q9BZV2 496 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 NKIRAS1Q9NYS0 192 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.63■□□□□ 0.09
CCDC43-204ENST00000588687 SLC7A7Q9UM01 511 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 UGT2A1Q9Y4X1 527 aa15.63■□□□□ 0.09
CCDC43-204ENST00000588687 ZSCAN5BA6NJL1 495 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 MGRN1O60291 552 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 UBOX5O94941 541 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 TGDSO95455 350 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 IGHV1-46P01743 117 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 IGHG1P01857 330 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 MPV17P39210 176 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 RAD52P43351 418 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 UBA52P62987 128 aaKnown RBP15.62■□□□□ 0.09
CCDC43-204ENST00000588687 TEKQ02763 1124 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 HNRNPA0Q13151 305 aaKnown RBP15.62■□□□□ 0.09
CCDC43-204ENST00000588687 FAM209AQ5JX71 171 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 DCAF12L2Q5VW00 463 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 C11orf65Q8NCR3 313 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 IPCEF1Q8WWN9 437 aaPredicted RBP15.62■□□□□ 0.09
CCDC43-204ENST00000588687 ASB10Q8WXI3 467 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 MARS2Q96GW9 593 aaKnown RBP15.62■□□□□ 0.09
CCDC43-204ENST00000588687 POM121L2Q96KW2 1035 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 RNF121Q9H920 327 aa15.62■□□□□ 0.09
CCDC43-204ENST00000588687 IGKV1D-43A0A0B4J1Z2 117 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 TRAPPC13A5PLN9 417 aa15.61■□□□□ 0.09
CCDC43-204ENST00000588687 EVPLLA8MZ36 301 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms