RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 Q8N1Y9 231 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 ZNF645Q8N7E2 425 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 COX18Q8N8Q8 333 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 CCDC89Q8N998 374 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 ZNF563Q8TA94 476 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 FGFBP3Q8TAT2 258 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 ANKRD49Q8WVL7 239 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 MAIP1Q8WWC4 291 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 PRPF18Q99633 342 aaKnown RBP5.43□□□□□ -1.54
TPM4-210ENST00000588507 OR2J1Q9GZK6 312 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 ELOVL6Q9H5J4 265 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 SMURF1Q9HCE7 757 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 RASD1Q9Y272 281 aa5.43□□□□□ -1.54
TPM4-210ENST00000588507 SF3B6Q9Y3B4 125 aaKnown RBP5.43□□□□□ -1.54
TPM4-210ENST00000588507 MUC2Q02817 5179 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 ELOVL7A1L3X0 281 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 LIPT2A6NK58 231 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 H3BSH0 61 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 J3QW42 95 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 ADAM20O43506 726 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 UGDHO60701 494 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 CRCPO75575 148 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 ZSCAN5DPP0CG00 497 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 PRKAR1BP31321 381 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 ACAA2P42765 397 aaKnown RBP5.42□□□□□ -1.54
TPM4-210ENST00000588507 P2RY4P51582 365 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 TERF1P54274 439 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 RWDD2BP57060 319 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 PLP2Q04941 152 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 SKP2Q13309 424 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 KCNJ8Q15842 424 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 PRSS53Q2L4Q9 553 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 XKR7Q5GH72 579 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 OSR2Q8N2R0 312 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 TEX9Q8N6V9 391 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 Q8N7P7 452 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 OR8U1Q8NH10 309 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 UTP4Q969X6 686 aaKnown RBP5.42□□□□□ -1.54
TPM4-210ENST00000588507 DMRTB1Q96MA1 342 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 BTBD2Q9BX70 525 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 C1QTNF3Q9BXJ4 246 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 MAN2C1Q9NTJ4 1040 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 EIF3KQ9UBQ5 218 aaKnown RBP5.42□□□□□ -1.54
TPM4-210ENST00000588507 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.42□□□□□ -1.54
TPM4-210ENST00000588507 TMCC3Q9ULS5 477 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 ANGPTL3Q9Y5C1 460 aa5.42□□□□□ -1.54
TPM4-210ENST00000588507 SIRT4Q9Y6E7 314 aaPredicted RBP5.42□□□□□ -1.54
TPM4-210ENST00000588507 TMED7-TICAM2A0A0A6YYA0 188 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 IQCMA0A1B0GVH7 501 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 TMEM72A0PK05 275 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 PSMB11A5LHX3 300 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 VGLL3A8MV65 326 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 H3BSA7 217 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 HDAC3O15379 428 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 AKR1B10O60218 316 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 IGF1P05019 195 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 IFI6P09912 130 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 ZNF43P17038 809 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 CCNOP22674 350 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 POU3F4P49335 361 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 ZNF460Q14592 562 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 SFRP4Q6FHJ7 346 aaPredicted RBP5.41□□□□□ -1.54
TPM4-210ENST00000588507 TMEM53Q6P2H8 277 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 Q6ZR03 302 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 GALNT7Q86SF2 657 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 PATL1Q86TB9 770 aaKnown RBP5.41□□□□□ -1.54
TPM4-210ENST00000588507 SNX32Q86XE0 403 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 SKA3Q8IX90 412 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 FAM71E2Q8N5Q1 922 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 LY6G5BQ8NDX9 201 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 C19orf18Q8NEA5 215 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 RPS4Y2Q8TD47 263 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 DCAKDQ8WVC6 231 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 EME1Q96AY2 570 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 PHF21BQ96EK2 531 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 NSUN5Q96P11 429 aaKnown RBP5.41□□□□□ -1.54
TPM4-210ENST00000588507 FOXB1Q99853 325 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 DERL2Q9GZP9 239 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 GLIPR2Q9H4G4 154 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 B3GAT2Q9NPZ5 323 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 ABCB10Q9NRK6 738 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 VNN3Q9NY84 501 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 FAM53CQ9NYF3 392 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 NFU1Q9UMS0 254 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 SLC12A4Q9UP95 1085 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 TMED7Q9Y3B3 224 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 RNF11Q9Y3C5 154 aa5.41□□□□□ -1.54
TPM4-210ENST00000588507 TCRBV7S3A2A0A539 114 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 ZC3H12DA2A288 527 aaKnown RBP5.4□□□□□ -1.54
TPM4-210ENST00000588507 PPP6CO00743 305 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 PSPNO60542 156 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 SCN2BO60939 215 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 UBTFL6P0CB48 400 aaPredicted RBP5.4□□□□□ -1.54
TPM4-210ENST00000588507 G6PDP11413 515 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 IRF2P14316 349 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 AHCYP23526 432 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 PRPH2P23942 346 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 APLNRP35414 380 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 HTR3AP46098 478 aa5.4□□□□□ -1.54
TPM4-210ENST00000588507 MAP2K6P52564 334 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms