RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GTF2IRD2BQ6EKJ0 949 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 XAF1Q6GPH4 301 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ABLIM2Q6H8Q1 611 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ZNF585AQ6P3V2 769 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 B3GNT6Q6ZMB0 384 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 C3P1Q6ZMU1 363 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 GTF2IRD2Q86UP8 949 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ZBTB46Q86UZ6 589 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 OR52I1Q8NGK6 324 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 OR2T27Q8NH04 317 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 OR4K13Q8NH42 304 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ZPLD1Q8TCW7 415 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 RAB2BQ8WUD1 216 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ASB10Q8WXI3 467 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 PTP4A1Q93096 173 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 SLC25A44Q96H78 314 aaPredicted RBP11.24□□□□□ -0.61
VMP1-202ENST00000585847 Q96M85 177 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 COG8Q96MW5 612 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 RBP7Q96R05 134 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 UCN2Q96RP3 112 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 DMRTA2Q96SC8 542 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 COQ7Q99807 217 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 YIPF3Q9GZM5 350 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 RNF122Q9H9V4 155 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 EMC3Q9P0I2 261 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ERVK-18Q9QC07 812 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 CLCF1Q9UBD9 225 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 MCTS1Q9ULC4 181 aaKnown RBP11.24□□□□□ -0.61
VMP1-202ENST00000585847 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 ZNF175Q9Y473 711 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 CENPEQ02224 2701 aa11.24□□□□□ -0.61
VMP1-202ENST00000585847 PRRC2CQ9Y520 2896 aaKnown RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 AHRRA9YTQ3 701 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 EIF1AYO14602 144 aaKnown RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 CXCL13O43927 109 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 TRMUO75648 421 aaKnown RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 AKR7A3O95154 331 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 SYNGR4O95473 234 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 SBK2P0C263 348 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 P2RY4P51582 365 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 RBPJQ06330 500 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 RNPS1Q15287 305 aaKnown RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 NEDD8Q15843 81 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 KLHL12Q53G59 568 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 MESTQ5EB52 335 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 KCTD20Q7Z5Y7 419 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 SYS1Q8N2H4 156 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 KLHL36Q8N4N3 616 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 OR10D3Q8NH80 312 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 KISS1RQ969F8 398 aaPredicted RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 NMNAT3Q96T66 252 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 MARCH7Q9H992 704 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 GLRX2Q9NS18 164 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 ASB6Q9NWX5 421 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 KLHL9Q9P2J3 617 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 KLHL13Q9P2N7 655 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 B3GAT1Q9P2W7 334 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 ZNF346Q9UL40 294 aaKnown RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
VMP1-202ENST00000585847 COMMD3-BMI1R4GMX3 469 aa11.23□□□□□ -0.61
VMP1-202ENST00000585847 IGKV3D-15A0A087WSY6 115 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 DPPA5A6NC42 116 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 OR6C68A6NDL8 312 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 CCDC182A6NF36 153 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 ZNF726A6NNF4 738 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 ZNF814B7Z6K7 855 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 MS4A18H0YCH9 400 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 J3QRE1 110 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 M0R129 80 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 PRRG2O14669 202 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 ARHGEF9O43307 516 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 TRAF3IP2O43734 574 aaPredicted RBP11.22□□□□□ -0.61
VMP1-202ENST00000585847 WDR1O75083 606 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 TOXO94900 526 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 SLC2A10O95528 541 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 TGM6O95932 706 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 PSMA1P25786 263 aaKnown RBP11.22□□□□□ -0.61
VMP1-202ENST00000585847 GSTT1P30711 240 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 WNT4P56705 351 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 MLLT11Q13015 90 aaPredicted RBP11.22□□□□□ -0.61
VMP1-202ENST00000585847 GPR50Q13585 617 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 RAB39AQ14964 217 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 SPHARQ15513 63 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 MS4A18Q3C1V0 323 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 C1orf185Q5T7R7 199 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 RPTNQ6XPR3 784 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 GDPGP1Q6ZNW5 385 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 CHMP1BQ7LBR1 199 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 SLC16A9Q7RTY1 509 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 IGFN1Q86VF2 1251 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 NANOGP1Q8N7R0 232 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 NOXO1Q8NFA2 376 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 ASB17Q8WXJ9 295 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 TMEM45BQ96B21 275 aa11.22□□□□□ -0.61
VMP1-202ENST00000585847 OTULINQ96BN8 352 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms