RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 NMNAT3Q96T66 252 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 FOXB1Q99853 325 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 SPOCK3Q9BQ16 436 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 GABARAPL3Q9BY60 117 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 SYT4Q9H2B2 425 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 VCX3BQ9H321 246 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 RERGLQ9H628 205 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 MOV10Q9HCE1 1003 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 OBP2BQ9NPH6 170 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 ZNF226Q9NYT6 803 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 AMDHD2Q9Y303 409 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 HELZ2Q9BYK8 2649 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 FLNCQ14315 2725 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 CASQ2O14958 399 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC16A7O60669 478 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC2A10O95528 541 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 WNT11O96014 354 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 NPR2P20594 1047 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 CCKARP32238 428 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 CDKN2AP42771 156 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 FOXG1P55316 489 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 FMODQ06828 376 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 RIPK1Q13546 671 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 PTGES3Q15185 160 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 LRRC36Q1X8D7 754 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 NRN1LQ496H8 165 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC25A47Q6Q0C1 308 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 PTCHD4Q6ZW05 846 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 OR2T4Q8NH00 348 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 BOD1Q96IK1 185 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 RDH12Q96NR8 316 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 MUS81Q96NY9 551 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 PSMG3-AS1Q96PY0 264 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 KCNN2Q9H2S1 579 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 NGBQ9NPG2 151 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 RPRD1BQ9NQG5 326 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 TMEM38BQ9NVV0 291 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 PLEKHB1Q9UF11 243 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 FREM1Q5H8C1 2179 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 HCFC1P51610 2035 aa12.81□□□□□ -0.36
SCAMP4-209ENST00000585335 USP9XQ93008 2570 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 SPTBN1Q01082 2364 aaKnown RBP12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 A0A1W2PPL8 197 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 ZAR1LA6NP61 321 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 OR8G3PP0DMU2 310 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 B4GALT1P15291 398 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 IGFBP2P18065 325 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 PEX2P28328 305 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 CAPZA2P47755 286 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 CENPAP49450 140 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 MRPS34P82930 218 aaKnown RBP12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 PPA1Q15181 289 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 SNAPC1Q16533 368 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 TBRG1Q3YBR2 411 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 LPCAT4Q643R3 524 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 ZNF627Q7L945 461 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 DPPA2Q7Z7J5 298 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 GLB1L2Q8IW92 636 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 GALNT4Q8N4A0 578 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC37A3Q8NCC5 494 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 NPEPL1Q8NDH3 523 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 BCL2L2Q92843 193 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 SEC61A2Q9H9S3 476 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC17A5Q9NRA2 495 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 SMPD3Q9NY59 655 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 FKBP7Q9Y680 259 aa12.8□□□□□ -0.36
SCAMP4-209ENST00000585335 A0A096LPE4 126 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 A0A1W2PPZ6 126 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 PRR23D1E9PI22 279 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SURF4O15260 269 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SEC14L2O76054 403 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 ATP6V1G2O95670 118 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 PRR23D2P0DMB1 279 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 BLVRAP53004 296 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC25A1P53007 311 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 CDC42P60953 191 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 GLO1Q04760 184 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 CRMP1Q14194 572 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SGCAQ16586 387 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 HIKESHIQ53FT3 197 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 OGFRL1Q5TC84 451 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SLX4IPQ5VYV7 408 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 TMEM236Q5W0B7 351 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SP5Q6BEB4 398 aaPredicted RBP12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 ALKBH2Q6NS38 261 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 ACSM5Q6NUN0 579 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC22A24Q8N4F4 322 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 CYB561A3Q8NBI2 242 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 ZNF555Q8NEP9 628 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 PROKR2Q8NFJ6 384 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 OR52N5Q8NH56 324 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 LINC01560Q8TB33 94 aa12.79□□□□□ -0.36
SCAMP4-209ENST00000585335 ZNF837Q96EG3 531 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms