RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 SIRPAP78324 504 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 CDK5R2Q13319 367 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 KLHL12Q53G59 568 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF362Q5T0B9 420 aaPredicted RBP11.44□□□□□ -0.58
TRIM47-202ENST00000585333 AADACL4Q5VUY2 407 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 OR7E24Q6IFN5 339 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 TFAP2EQ6VUC0 442 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 CYB561A3Q8NBI2 242 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
TRIM47-202ENST00000585333 OR10H5Q8NGA6 315 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 OR6K6Q8NGW6 343 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 IPCEF1Q8WWN9 437 aaPredicted RBP11.44□□□□□ -0.58
TRIM47-202ENST00000585333 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
TRIM47-202ENST00000585333 MCHR2Q969V1 340 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF582Q96NG8 517 aaPredicted RBP11.44□□□□□ -0.58
TRIM47-202ENST00000585333 HDHD5Q9BXW7 423 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 NUAK2Q9H093 628 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 OR51V1Q9H2C8 321 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 ELOVL5Q9NYP7 299 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF226Q9NYT6 803 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 TAS2R16Q9NYV7 291 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 CNOT2Q9NZN8 540 aaKnown RBP11.44□□□□□ -0.58
TRIM47-202ENST00000585333 SH3BGRL2Q9UJC5 107 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 B9D1Q9UPM9 204 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 GPR52Q9Y2T5 361 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 BAHCC1Q9P281 2608 aa11.44□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF99A8MXY4 864 aaPredicted RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 PHYHO14832 338 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 MRPS14O60783 128 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 TNFSF13O75888 250 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 SMNDC1O75940 238 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 FADS2O95864 444 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 HLA-DQA2P01906 255 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 GNAO1P09471 354 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 PIPP12273 146 aaPredicted RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 GABRB1P18505 474 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 LAP3P28838 519 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 CAPZA2P47755 286 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 PCBD1P61457 104 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 LSM6P62312 80 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 MRPS34P82930 218 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 ROR2Q01974 943 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 HSF2Q03933 536 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 RAB40BQ12829 278 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 APOFQ13790 326 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 GGTLC2Q14390 218 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 C6orf141Q5SZD1 244 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 SLC25A47Q6Q0C1 308 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 SEM1Q6ZVN7 128 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 SHFQ7M4L6 423 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 NUFIP2Q7Z417 695 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 EGFL6Q8IUX8 553 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 CCDC71Q8IV32 467 aaPredicted RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 C17orf78Q8N4C9 275 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 NR1H4Q96RI1 486 aaPredicted RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 DDOQ99489 341 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 TEAD3Q99594 435 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 RBM24Q9BX46 236 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 NELFAQ9H3P2 528 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 RERGLQ9H628 205 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 C12orf49Q9H741 205 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 CRLF2Q9HC73 371 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 INPP5EQ9NRR6 644 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 CHCHD3Q9NX63 227 aaKnown RBP11.43□□□□□ -0.58
TRIM47-202ENST00000585333 FBXL3Q9UKT7 428 aa11.43□□□□□ -0.58
TRIM47-202ENST00000585333 IGLV1-36A0A0B4J1U3 117 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 FAM183AA6NL82 134 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 C12orf71A8MTZ7 269 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 H7C1C5 153 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 FAM20BO75063 409 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 ENTPD6O75354 484 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 SLC2A10O95528 541 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 CLIC3O95833 236 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 MSR1P21757 451 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 GSTT1P30711 240 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 PEX19P40855 299 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 GABARAPL2P60520 117 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 LCN6P62502 163 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 RUNX1T1Q06455 604 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 SOWAHCQ53LP3 525 aaPredicted RBP11.42□□□□□ -0.58
TRIM47-202ENST00000585333 TSPO2Q5TGU0 170 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 KLHL24Q6TFL4 600 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 C3P1Q6ZMU1 363 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF627Q7L945 461 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 SYT9Q86SS6 491 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 OR6V1Q8N148 313 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF786Q8N393 782 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 OR9Q1Q8NGQ5 310 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 HAVCR2Q8TDQ0 301 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 PTP4A1Q93096 173 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 ZNF775Q96BV0 537 aaPredicted RBP11.42□□□□□ -0.58
TRIM47-202ENST00000585333 NMD3Q96D46 503 aaKnown RBP11.42□□□□□ -0.58
TRIM47-202ENST00000585333 STARD4Q96DR4 205 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 ALKBH3Q96Q83 286 aaPredicted RBP11.42□□□□□ -0.58
TRIM47-202ENST00000585333 INTS14Q96SY0 518 aa11.42□□□□□ -0.58
TRIM47-202ENST00000585333 CNN2Q99439 309 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms