RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 KDM4DQ6B0I6 523 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 FAHD1Q6P587 224 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 ANKRD16Q6P6B7 361 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 VHLLQ6RSH7 139 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 GPAT4Q86UL3 456 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 RBM45Q8IUH3 476 aaKnown RBP9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 OFCC1Q8IZS5 231 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 GALNT4Q8N4A0 578 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 LSMEM1Q8N8F7 131 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 OR1K1Q8NGR3 316 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 MAGEE2Q8TD90 523 aaPredicted RBP9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 ZFAND2BQ8WV99 257 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 TFAP2CQ92754 450 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 PRRC1Q96M27 445 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 ZNF442Q9H7R0 627 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 DYNLRB1Q9NP97 96 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 RLIMQ9NVW2 624 aa9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 HEATR1Q9H583 2144 aaKnown RBP9.32□□□□□ -0.92
CSNK1D-226ENST00000585026 ARPC4-TTLL3A0A0A6YYG9 625 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 LIPT2A6NK58 231 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 AQP7P3A6NL99 342 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 CLDN24A6NM45 220 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 H0YAE9 185 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 J3KTA2 159 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 M0R3H8 397 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 AKR7A3O95154 331 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 H1F0P07305 194 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 IFNGR1P15260 489 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 NPR2P20594 1047 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 IFNA8P32881 189 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 ACAA2P42765 397 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 COPZ1P61923 177 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 PIN1Q13526 163 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 TAF11Q15544 211 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 OR7A5Q15622 319 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 MRPL2Q5T653 305 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 ZNF770Q6IQ21 691 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 RANBP3LQ86VV4 465 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 ZNF786Q8N393 782 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 TEX29Q8N6K0 151 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 TMEM99Q8N816 258 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 NUP37Q8NFH4 326 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 IL17RDQ8NFM7 739 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 VANGL1Q8TAA9 524 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 GIPC3Q8TF64 312 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 CNOT9Q92600 299 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 ZMYND19Q96E35 227 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 ZNF385AQ96PM9 386 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 Q9H521 79 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 OCEL1Q9H607 264 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 MAN2C1Q9NTJ4 1040 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 PDP1Q9P0J1 537 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 CRNNQ9UBG3 495 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 TESQ9UGI8 421 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 RASD1Q9Y272 281 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 LRCH1Q9Y2L9 728 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 U3KQV3 271 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 CUBNO60494 3623 aa9.31□□□□□ -0.92
CSNK1D-226ENST00000585026 YLPM1P49750 1951 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 LRP5LA4QPB2 252 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 B4DSR2 109 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 E9PQ18 207 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 AP3D1O14617 1153 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 SLC16A6O15403 523 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 SPRY1O43609 319 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 PRKACGP22612 351 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 YAP1P46937 504 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 DAPP51397 102 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 RAD23AP54725 363 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 DVL1P1P54792 670 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 CDH12P55289 794 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 CDH15P55291 814 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 RGS8P57771 180 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 ADARB1P78563 741 aaKnown RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 SPIBQ01892 262 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 ST3GAL3Q11203 375 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 TRAM2Q15035 370 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 SLC36A3Q495N2 470 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 ZNF613Q6PF04 617 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 CD300LDQ6UXZ3 194 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 DEF8Q6ZN54 512 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 HMGN2P46Q86SG4 172 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 GLCCI1Q86VQ1 547 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 TSPYL5Q86VY4 417 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 CCDC36Q8IYA8 594 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 HS3ST5Q8IZT8 346 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 ZIC4Q8N9L1 334 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 UBASH3BQ8TF42 649 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 BCL2L2Q92843 193 aaPredicted RBP9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 MCHR1Q99705 422 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 FNDC11Q9BVV2 318 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 LINC00470Q9BZP3 86 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 SMURF2Q9HAU4 748 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 TMCC3Q9ULS5 477 aa9.3□□□□□ -0.92
CSNK1D-226ENST00000585026 SH3PXD2BA1X283 911 aa9.29□□□□□ -0.92
CSNK1D-226ENST00000585026 ZC3H12DA2A288 527 aaKnown RBP9.29□□□□□ -0.92
CSNK1D-226ENST00000585026 TRAPPC13A5PLN9 417 aa9.29□□□□□ -0.92
CSNK1D-226ENST00000585026 A8MVM7 634 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms