RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 OR51B4Q9Y5P0 310 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 V9GYH0 126 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 DSPPQ9NZW4 1301 aa3.38□□□□□ -1.87
SMCHD1-208ENST00000583344 ADAMTS9Q9P2N4 1935 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 A0A0U1RQS6 177 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 MEX3AA1L020 520 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 HYKKA2RU49 373 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ANKUB1A6NFN9 424 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 A8MU76 341 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 B4DXG7 233 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SCAMP2O15127 329 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CTDSPLO15194 276 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 PLA2G10O15496 165 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SSX4O60224 188 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 KHDRBS3O75525 346 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 DIRAS1O95057 198 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 MFN2O95140 757 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 AKR7A3O95154 331 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 IFNA14P01570 189 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 TRBC1P01850 177 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 C1QBP02746 253 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RHOCP08134 193 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RAB40ALP0C0E4 278 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 HIST1H2AGP0C0S8 130 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 OR4Q2P0C623 313 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 OR56A5P0C7T3 313 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 HLA-EP13747 358 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ATF6P18850 670 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 PSMA1P25786 263 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 PKLRP30613 574 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 FGF9P31371 208 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CA5AP35218 305 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 XCR1P46094 333 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ASCL1P50553 236 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 NKX2-5P52952 324 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CRISP3P54108 245 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RAB25P57735 213 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 PFN3P60673 137 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CDC42P60953 191 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 HNRNPKP61978 463 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CDK3Q00526 305 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 BEX3Q00994 111 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 COX10Q12887 443 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 MLLT11Q13015 90 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GAGE2BQ13066 116 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 TPBGQ13641 420 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GAMTQ14353 236 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SPHARQ15513 63 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CHRNA6Q15825 494 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF79Q15937 498 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SSX1Q16384 188 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CARTPTQ16568 116 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GAGE2EQ4V326 116 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GPAT3Q53EU6 434 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 Q5BKY6 102 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 C6orf183Q5T699 404 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ARMC12Q5T9G4 340 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SDHAF4Q5VUM1 108 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 PRAMEF8Q5VWM4 474 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 NXNL2Q5VZ03 156 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 C12orf73Q69YU5 71 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF770Q6IQ21 691 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF343Q6P1L6 599 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 FIGLAQ6QHK4 219 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC24A5Q71RS6 500 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF767PQ75MW2 155 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SIAH3Q8IW03 269 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SERPINA12Q8IW75 414 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 NATD1Q8N6N6 113 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 Q8N9G6 341 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 TRPV1Q8NER1 839 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 OR10G2Q8NGC3 310 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 OR10Q1Q8NGQ4 319 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ZFAND1Q8TCF1 268 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 LKAAEAR1Q8TD35 194 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 FGF11Q92914 225 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RIT1Q92963 219 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 MTERF3Q96E29 417 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM80Q96HE8 168 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CEP19Q96LK0 163 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 OPALINQ96PE5 141 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 TSSK3Q96PN8 268 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 NEDD4LQ96PU5 975 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SMIM14Q96QK8 99 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 OR5M11Q96RB7 305 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC22A12Q96S37 553 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 NIPSNAP1Q9BPW8 284 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CCM2Q9BSQ5 444 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 LRRC61Q9BV99 259 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC22A4Q9H015 551 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ELOVL6Q9H5J4 265 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RNF167Q9H6Y7 350 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RNF121Q9H920 327 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 LMAN1LQ9HAT1 526 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 FGF20Q9NP95 211 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC35D1Q9NTN3 355 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CLN6Q9NWW5 311 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 MS4A12Q9NXJ0 267 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GPR83Q9NYM4 423 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms