RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 CCL17Q92583 94 aa12.53□□□□□ -0.4
CDK5RAP3-226ENST00000583182 ELMOD3Q96FG2 381 aa12.53□□□□□ -0.4
CDK5RAP3-226ENST00000583182 SLC25A44Q96H78 314 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-226ENST00000583182 C1orf147Q96MC9 270 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-226ENST00000583182 CENPHQ9H3R5 247 aa12.53□□□□□ -0.4
CDK5RAP3-226ENST00000583182 DNAJC9-AS1A6NH13 148 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SPRY3O43610 288 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ENTPD5O75356 428 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 UBOX5O94941 541 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 IGHV1-46P01743 117 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MMP7P09237 267 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 DRD4P21917 467 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PRTN3P24158 256 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZFP36P26651 326 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 AQP1P29972 269 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF81P51508 661 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF74Q16587 644 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SLC36A2Q495M3 483 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 FAM209AQ5JX71 171 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 LRIF1Q5T3J3 769 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 HHATQ5VTY9 493 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 DOK3Q7L591 496 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 DPPA2Q7Z7J5 298 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MREGQ8N565 214 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 LRRC17Q8N6Y2 441 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 OR1J2Q8NGS2 313 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MMP26Q9NRE1 261 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 UBAP1Q9NZ09 502 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF69Q9UC07 566 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 LEF1Q9UJU2 399 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 TRIM33Q9UPN9 1127 aa12.52□□□□□ -0.41
CDK5RAP3-226ENST00000583182 IQCMA0A1B0GVH7 501 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ISPDA4D126 451 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PRORSD1PA6NEY8 169 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZSCAN5BA6NJL1 495 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 M0R3H8 397 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 RNF13O43567 381 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 CH25HO95992 272 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PTHP01270 115 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MT-ND5P03915 603 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 THY1P04216 161 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MPV17P39210 176 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MMP15P51511 669 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SCARB2Q14108 478 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MOGQ16653 247 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SPRNQ5BIV9 151 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 CEP85LQ5SZL2 805 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SPATA46Q5T0L3 261 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF613Q6PF04 617 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF101Q8IZC7 436 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 CPEB3Q8NE35 698 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 IPCEF1Q8WWN9 437 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MCHR2Q969V1 340 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF48Q96MX3 618 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF347Q96SE7 839 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MCHR1Q99705 422 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 LRMDAQ9H2I8 198 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 UNKLQ9H9P5 680 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 VAPAQ9P0L0 249 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PPIAL4EA0A075B759 164 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 TRBV5-3A0A0A0MS03 114 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PPIAL4CA0A0B4J2A2 164 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PPIAL4DF5H284 164 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 CHP2O43745 196 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 LYPD3O95274 346 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PPIAL4FP0DN26 164 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 CCNOP22674 350 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 APLNRP35414 380 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 RBMXP38159 391 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 WNT5AP41221 380 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PLP2Q04941 152 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 NPTX1Q15818 432 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 HIST3H3Q16695 136 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 PAGE3Q5JUK9 113 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 THEM4Q5T1C6 240 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 FUNDC1Q8IVP5 155 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 SMYD1Q8NB12 490 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 BHLHE22Q8NFJ8 381 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 TAF15Q92804 592 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 POP5Q969H6 163 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 MARS2Q96GW9 593 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ZNF607Q96SK3 696 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 ARHGDIGQ99819 225 aa12.5□□□□□ -0.41
CDK5RAP3-226ENST00000583182 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms