RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	PLP2	Q04941	152 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PIGF	Q07326	219 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	KRTAP1-1	Q07627	177 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SNTB2	Q13425	540 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	VHLL	Q6RSH7	139 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ZNF730	Q6ZMV8	503 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708		Q71RC1	249 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	OAF	Q86UD1	273 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MYPOP	Q86VE0	399 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NRM	Q8IXM6	262 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ZNF525	Q8N782	197 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MRPL24	Q96A35	216 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NMD3	Q96D46	503 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	LRRC37B	Q96QE4	947 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RBP7	Q96R05	134 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	TNFRSF13C	Q96RJ3	184 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	KCNK17	Q96T54	332 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	WAC	Q9BTA9	647 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FAM107B	Q9H098	131 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	LRMDA	Q9H2I8	198 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	KCNN2	Q9H2S1	579 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MS4A5	Q9H3V2	200 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	DCAF13	Q9NV06	445 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SLC7A8	Q9UHI5	535 aa		10.88	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708		A0A087WUU8	490 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	EFCAB9	A8MZ26	197 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	HSD17B1	P14061	328 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ITGA2	P17301	1181 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RHCE	P18577	417 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PCSK6	P29122	969 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GUCA1A	P43080	201 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SMIM11A	P58511	58 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	VLDLR	P98155	873 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RUNX1T1	Q06455	604 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	LAPTM4A	Q15012	233 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SAMD4B	Q5PRF9	694 aa	Known RBP	10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GLYAT	Q6IB77	296 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	UNQ6126/PRO20091	Q6UXV3	157 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SLC16A14	Q7RTX9	510 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PIGW	Q7Z7B1	504 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	C1orf174	Q8IYL3	243 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PGAM4	Q8N0Y7	254 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ANKS4B	Q8N8V4	417 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	OR4K5	Q8NGD3	323 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MOSPD2	Q8NHP6	518 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SORCS2	Q96PQ0	1159 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ZNF347	Q96SE7	839 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	VRK1	Q99986	396 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PIMREG	Q9BSJ6	248 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ADA2	Q9NZK5	511 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MAGEL2	Q9UJ55	1249 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SNX13	Q9Y5W8	968 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CR1	P17927	2039 aa		10.87	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SON	P18583	2426 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	IQCM	A0A1B0GVH7	501 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	TMEM129	A0AVI4	362 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	VWC2L	B2RUY7	222 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SYNGR3	O43761	229 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PIP5K1C	O60331	668 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	H1F0	P07305	194 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MAK	P20794	623 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	USF1	P22415	310 aa	Predicted RBP	10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RAD52	P43351	418 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SELENOV	P59797	346 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RAB39A	Q14964	217 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GKAP1	Q5VSY0	366 aa	Predicted RBP	10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FAM27B	Q5VT28	67 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	KRT80	Q6KB66	452 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SLC25A47	Q6Q0C1	308 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ZNF584	Q8IVC4	421 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	ARIH2OS	Q8N7S6	290 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	LRRC75A	Q8NAA5	344 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SYT14	Q8NB59	555 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SLC30A7	Q8NEW0	376 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SLC7A13	Q8TCU3	470 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MS4A3	Q96HJ5	214 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	C7orf34	Q96L11	122 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	SH3GL3	Q99963	347 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	BCL2L14	Q9BZR8	327 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	RNF121	Q9H920	327 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NDUFAF4	Q9P032	175 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GMPR2	Q9P2T1	348 aa	Known RBP	10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	TAGLN3	Q9UI15	199 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GPR160	Q9UJ42	338 aa		10.86	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708		J3KTA2	159 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CRLF1	O75462	422 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CD14	P08571	375 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MMP7	P09237	267 aa	Predicted RBP	10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GIF	P27352	417 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	NR4A2	P43354	598 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	YAP1	P46937	504 aa	Known RBP	10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CTXN1	P60606	82 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	PCBD1	P61457	104 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	GNGT1	P63211	74 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	CD47	Q08722	323 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	FHL1	Q13642	323 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	KRT72	Q14CN4	511 aa		10.85	□□□□□ -0.67
CDK5RAP3-222	ENST00000581708	MOG	Q16653	247 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms