RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 IGLV1-50A0A075B6I6 118 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 A0A0B4J2A0 478 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 RP2O75695 350 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 B3GALNT1O75752 331 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 CBR3O75828 277 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 UTS2O95399 124 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 HLA-DPB1P04440 258 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 HSPA5P11021 654 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 HRH1P35367 487 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 ACAA2P42765 397 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 CDKN1BP46527 198 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 SLC11A1P49279 550 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 ARG2P78540 354 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 OGDHQ02218 1023 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF92Q03936 586 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 ELP6Q0PNE2 266 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 MAB21L1Q13394 359 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 SLC39A6Q13433 755 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 RABL6Q3YEC7 729 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 UQCC3Q6UW78 93 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 PEX26Q7Z412 305 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 DHDDSQ86SQ9 333 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 ABHD3Q8WU67 409 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 TMEM54Q969K7 222 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 NARS2Q96I59 477 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 PANX2Q96RD6 677 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 COPS8Q99627 209 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 SH3GL3Q99963 347 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 SULT4A1Q9BR01 284 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 HPF1Q9NWY4 346 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 SHPKQ9UHJ6 478 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 ZNF229Q9UJW7 825 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 PTBP2Q9UKA9 531 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 PTPRTO14522 1441 aa1.47□□□□□ -2.17
SMCHD1-206ENST00000581631 NUP214P35658 2090 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 CCL21O00585 134 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF806P0C7X5 589 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 C1GALT1C1LP0DN25 315 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 PSMA5P28066 241 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 SERPINB5P36952 375 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 CEACAM6P40199 344 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 GRIA1P42261 906 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 UGT2B15P54855 530 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 RGNQ15493 299 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 SNRNP35Q16560 246 aaKnown RBP1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 ZSCAN26Q16670 478 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 KCTD21Q4G0X4 260 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 SMUG1Q53HV7 270 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 SAXO2Q658L1 398 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 OAFQ86UD1 273 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 LHFPL3Q86UP9 236 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 GATSQ8NAP1 163 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 RLN3Q8WXF3 142 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 CREB3L1Q96BA8 519 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 FAM3DQ96BQ1 224 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 C10orf35Q96D05 121 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 C16orf45Q96MC5 204 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 RPRD1AQ96P16 312 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 P2RX4Q99571 388 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 KCTD14Q9BQ13 255 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 TIMM29Q9BSF4 260 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 ZSCAN5AQ9BUG6 496 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 SLC25A2Q9BXI2 301 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 UBE2ZQ9H832 354 aaPredicted RBP1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 RMND5AQ9H871 391 aa1.46□□□□□ -2.18
SMCHD1-206ENST00000581631 PEX11AO75192 247 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 ERLIN2O94905 339 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CLDN9O95484 217 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CCNE2O96020 404 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 UBTFL6P0CB48 400 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CALM1P0DP23 149 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CALM2P0DP24 149 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CALM3P0DP25 149 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 MAS1LP35410 378 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 HSD17B2P37059 387 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 OPRK1P41145 380 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 YAP1P46937 504 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CCT3P49368 545 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 NUTF2P61970 127 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 FGL1Q08830 312 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 TCP10Q12799 353 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 MRPL28Q13084 256 aaKnown RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 PIGHQ14442 188 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 ARHGAP19Q14CB8 494 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 IRF4Q15306 451 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 IGFBP7Q16270 282 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 GALNT17Q6IS24 598 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 Q6ZPB1 254 aaPredicted RBP1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 HDDC2Q7Z4H3 204 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 NOXO1Q8NFA2 376 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 OR2T3Q8NH03 318 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 COQ8AQ8NI60 647 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 LKAAEAR1Q8TD35 194 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 C15orf40Q8WUR7 153 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 SCFD1Q8WVM8 642 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF681Q96N22 645 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 CAMK2N2Q96S95 79 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 TCHPQ9BT92 498 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 TRIM62Q9BVG3 475 aa1.45□□□□□ -2.18
SMCHD1-206ENST00000581631 TMEM59Q9BXS4 323 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms