RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ZNF718Q3SXZ3 478 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 SLC36A2Q495M3 483 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 SLC16A14Q7RTX9 510 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 DPPA2Q7Z7J5 298 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 PARP8Q8N3A8 854 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 KLHL36Q8N4N3 616 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 SPICQ8N5J4 248 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 C10orf53Q8N6V4 93 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 OR4K5Q8NGD3 323 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 C16orf45Q96MC5 204 aaPredicted RBP10.74□□□□□ -0.69
SS18-219ENST00000581570 MOGAT1Q96PD6 335 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 RBM4BQ9BQ04 359 aaKnown RBP10.74□□□□□ -0.69
SS18-219ENST00000581570 SLC6A13Q9NSD5 602 aa10.74□□□□□ -0.69
SS18-219ENST00000581570 MRPL39Q9NYK5 338 aaKnown RBP10.74□□□□□ -0.69
SS18-219ENST00000581570 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 ZSCAN5BA6NJL1 495 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 C11orf98E9PRG8 122 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 DHHO43323 396 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 CCNOP22674 350 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 HTR2AP28223 471 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 CD80P33681 288 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 APLNRP35414 380 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 MPV17P39210 176 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 SEC61A1P61619 476 aaKnown RBP10.73□□□□□ -0.69
SS18-219ENST00000581570 SPATA46Q5T0L3 261 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 THEM4Q5T1C6 240 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 ASPHD2Q6ICH7 369 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 ULK3Q6PHR2 472 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 LRFN4Q6PJG9 635 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 NUDCD3Q8IVD9 361 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 RBM15BQ8NDT2 890 aaKnown RBP10.73□□□□□ -0.69
SS18-219ENST00000581570 OR6X1Q8NH79 312 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 IPCEF1Q8WWN9 437 aaPredicted RBP10.73□□□□□ -0.69
SS18-219ENST00000581570 GEMIN6Q8WXD5 167 aaKnown RBP10.73□□□□□ -0.69
SS18-219ENST00000581570 SLC47A1Q96FL8 570 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 TPT1P8Q9HAU6 139 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 TNFRSF19Q9NS68 423 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 CYSLTR2Q9NS75 346 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 DCAF16Q9NXF7 216 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 THUMPD1Q9NXG2 353 aaKnown RBP10.73□□□□□ -0.69
SS18-219ENST00000581570 SELENONQ9NZV5 590 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 OR5V1Q9UGF6 321 aa10.73□□□□□ -0.69
SS18-219ENST00000581570 CLPSL1A2RUU4 121 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 A8MXK9 166 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 LRRN3E7EW58 273 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 ANP32DO95626 131 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 NGFP01138 241 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 ADH4P08319 380 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 ALDOCP09972 364 aaKnown RBP10.72□□□□□ -0.69
SS18-219ENST00000581570 ADORA3P0DMS8 318 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 LIPAP38571 399 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 HNRNPA0Q13151 305 aaKnown RBP10.72□□□□□ -0.69
SS18-219ENST00000581570 TMEM155Q4W5P6 130 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 SPRNQ5BIV9 151 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 TMEM255AQ5JRV8 349 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 FAM91A1Q658Y4 838 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 SLC35D2Q76EJ3 337 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 LRRC28Q86X40 367 aaPredicted RBP10.72□□□□□ -0.69
SS18-219ENST00000581570 BHLHE22Q8NFJ8 381 aaPredicted RBP10.72□□□□□ -0.69
SS18-219ENST00000581570 ZNF566Q969W8 418 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 MARS2Q96GW9 593 aaKnown RBP10.72□□□□□ -0.69
SS18-219ENST00000581570 ZBTB18Q99592 522 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 RHOXF2Q9BQY4 288 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 NUF2Q9BZD4 464 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 BCL2L10Q9HD36 194 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 TMEM106BQ9NUM4 274 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 C1RLQ9NZP8 487 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 EIF3KQ9UBQ5 218 aaKnown RBP10.72□□□□□ -0.69
SS18-219ENST00000581570 ZDHHC8Q9ULC8 765 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
SS18-219ENST00000581570 SRRM5B3KS81 715 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 F5H0A9 414 aaPredicted RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 NDUFA7O95182 113 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 OR6A2O95222 327 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 PLATP00750 562 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 CD55P08174 381 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 QDPRP09417 244 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 PPIAL4GP0DN37 164 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 SELEP16581 610 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 RBMXP38159 391 aaKnown RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 RPL14P50914 215 aaKnown RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 KRTAP10-3P60369 221 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 ABCE1P61221 599 aaKnown RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 TNFAIP6P98066 277 aaPredicted RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 RELBQ01201 579 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 HSF2Q03933 536 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 MBNL2Q5VZF2 373 aaKnown RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 OGFOD2Q6N063 350 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 FIP1L1Q6UN15 594 aaKnown RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 OR5J2Q8NH18 312 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 BBS10Q8TAM1 723 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 KLF14Q8TD94 323 aaPredicted RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 UPRTQ96BW1 309 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 SLC25A44Q96H78 314 aaPredicted RBP10.71□□□□□ -0.69
SS18-219ENST00000581570 OR2J1Q9GZK6 312 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 TMEM27Q9HBJ8 222 aa10.71□□□□□ -0.69
SS18-219ENST00000581570 AIG1Q9NVV5 245 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms