RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 BCL2L14Q9BZR8 327 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 PCDHAC1Q9H158 963 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 LRMDAQ9H2I8 198 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 RABEP2Q9H5N1 569 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 RNF121Q9H920 327 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 CDH20Q9HBT6 801 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 LPAR2Q9HBW0 351 aa9.05□□□□□ -0.96
RFFL-209ENST00000581265 CPSF4LA6NMK7 179 aaKnown RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 CENPBD1B2RD01 187 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 CDC14BO60729 498 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 PNPP00491 289 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 IGHG1P01857 330 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 OPN1SWP03999 348 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 ZNF133P52736 654 aaPredicted RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 TEKQ02763 1124 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 PLP2Q04941 152 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 CYP51A1Q16850 503 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 TBC1D28Q2M2D7 210 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 BEND6Q5SZJ8 279 aaPredicted RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 ACSM5Q6NUN0 579 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 SHQ1Q6PI26 577 aaKnown RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 SLC16A14Q7RTX9 510 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 PATL1Q86TB9 770 aaKnown RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 TSPYL5Q86VY4 417 aaPredicted RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 SLC30A8Q8IWU4 369 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 LRRC8CQ8TDW0 803 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 TSPEARQ8WU66 669 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 SNX33Q8WV41 574 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 CGREF1Q99674 301 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 PRSS27Q9BQR3 290 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 KAT8Q9H7Z6 458 aaKnown RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 MEPEQ9NQ76 525 aaPredicted RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 G6PC2Q9NQR9 355 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 LEF1Q9UJU2 399 aaPredicted RBP9.04□□□□□ -0.96
RFFL-209ENST00000581265 SLC7A7Q9UM01 511 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 PCDHB10Q9UN67 800 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 TRIM33Q9UPN9 1127 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 NDUFAF1Q9Y375 327 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 MGAM2Q2M2H8 2515 aa9.04□□□□□ -0.96
RFFL-209ENST00000581265 DYSFO75923 2080 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 IGHV1-69-2A0A0G2JMI3 117 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 IQCMA0A1B0GVH7 501 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 TMEM89A2RUT3 159 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 BLOC1S5-TXNDC5H3BN57 136 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 PLPP2O43688 288 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 DEAF1O75398 565 aaPredicted RBP9.03□□□□□ -0.96
RFFL-209ENST00000581265 AVPP01185 164 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 IGHV3-13P01766 116 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 LCKP06239 509 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 MMP7P09237 267 aaPredicted RBP9.03□□□□□ -0.96
RFFL-209ENST00000581265 CD247P20963 164 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ZNF84P51523 738 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ARFIP2P53365 341 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 MTPNP58546 118 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 HILS1P60008 231 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ERVS71-1P61550 626 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 SELPLGQ14242 412 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 MELKQ14680 651 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ALKBH6Q3KRA9 238 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 AGBL2Q5U5Z8 902 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 DHDDSQ86SQ9 333 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 RETREG3Q86VR2 466 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 CPEB3Q8NE35 698 aaKnown RBP9.03□□□□□ -0.96
RFFL-209ENST00000581265 STON2Q8WXE9 905 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 TAMM41Q96BW9 452 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ZNF347Q96SE7 839 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ZNF665Q9H7R5 613 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 SIAEQ9HAT2 523 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 ZNF281Q9Y2X9 895 aa9.03□□□□□ -0.96
RFFL-209ENST00000581265 A0A0G2JMP0 313 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 A0A0X1KG70 313 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 TRIM77I1YAP6 450 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 J3QLI3 93 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 KPNA4O00629 521 aaPredicted RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 ANGPT2O15123 496 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 MPZL1O95297 269 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 IGF2P01344 180 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 MT-ND1P03886 318 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 MT-ND5P03915 603 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 VIMP08670 466 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 TSPAN19P0C672 248 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 UMPSP11172 480 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 ACADSP16219 412 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 FUT1P19526 365 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 EPHA1P21709 976 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 PCGF2P35227 344 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 APLNRP35414 380 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 GZMMP51124 257 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 CRYBA2P53672 197 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 UGT2B15P54855 530 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 CLRN1P58418 232 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 MRPS34P82930 218 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 MVKQ03426 396 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 RPL18Q07020 188 aaKnown RBP9.02□□□□□ -0.97
RFFL-209ENST00000581265 HFEQ30201 348 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 MIDNQ504T8 468 aa9.02□□□□□ -0.97
RFFL-209ENST00000581265 FAM209AQ5JX71 171 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms