RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 MTCH1Q9NZJ7 389 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 RGS11O94810 467 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 CLEC1AQ8NC01 280 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 OR52I2Q8NH67 350 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 SLCO4A1Q96BD0 722 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 MRPL38Q96DV4 380 aaKnown RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 SLC46A2Q9BY10 475 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 PIGLQ9Y2B2 252 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 MN1Q10571 1320 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 GPX5O75715 221 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 ACHEP22303 614 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 MED25Q71SY5 747 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 LCORQ96JN0 433 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 CHD4Q14839 1912 aa13.39□□□□□ -0.27
CSNK1D-217ENST00000581241 TCRBV5S1A1TA0A578 114 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A6P0DMU7 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A5P0DMU8 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A7P0DMV0 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A8P0DMV1 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A9P0DMV2 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 PHLDA2Q53GA4 152 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A2Q5DJT8 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A1Q5HYN5 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TOR2AQ5JU69 321 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 PHYHD1Q5SRE7 291 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 OR1J2Q8NGS2 313 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CT45A3Q8NHU0 189 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TIMP1P01033 207 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 HLA-FP30511 346 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CPEB2Q7Z5Q1 589 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 DDX60Q8IY21 1712 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 H0Y8G0 127 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 HCRTR1O43613 425 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 NME2P1O60361 137 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 MFSD12Q6NUT3 480 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEM71Q6P5X7 295 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 DCXRQ7Z4W1 244 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TOE1Q96GM8 510 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 ZNF845Q96IR2 970 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 EPHX3Q9H6B9 360 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 ACER3Q9NUN7 267 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 GPR160Q9UJ42 338 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 APEHP13798 732 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 MAP2K6P52564 334 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 DGCR2P98153 550 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 ACOT7LQ6ZUV0 252 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 AAED1Q7RTV5 226 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 OR11L1Q8NGX0 322 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 DUSP23Q9BVJ7 150 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 UFSP2Q9NUQ7 469 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 LHX6Q9UPM6 363 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 NOSIPQ9Y314 301 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 URGCP-MRPS24S4R325 110 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 UMAD1C9J7I0 102 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TIMM8AO60220 97 aaPredicted RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CD14P08571 375 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 SFT2D1Q8WV19 159 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 ACOXLQ9NUZ1 547 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 TAS2R4Q9NYW5 299 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 CHST2Q9Y4C5 530 aa13.38□□□□□ -0.27
CSNK1D-217ENST00000581241 PRAMEF4O60810 478 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 BCL6P41182 706 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 C17orf67Q0P5P2 114 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 C9orf135Q5VTT2 229 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 DHRS4L2Q6PKH6 230 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 ZBTB44Q8NCP5 570 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 OR13C8Q8NGS7 320 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 AKIP1Q9NQ31 210 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 SPHK1Q9NYA1 384 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 CHRNA9Q9UGM1 479 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 NSG1A0A0A6YYJ2 146 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 MT-ATP6P00846 226 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 EIF4EP06730 217 aaKnown RBP13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 AANATQ16613 207 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 RNF151Q2KHN1 245 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 FAM174AQ8TBP5 190 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 CTRCQ99895 268 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 ERVMER34-1Q9H9K5 563 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 B3GALT5Q9Y2C3 310 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 CHRM2P08172 466 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 RAB1AP62820 205 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEM207Q6UWW9 146 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 TMEM99Q8N816 258 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 SUCNR1Q9BXA5 334 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 SUMF1Q8NBK3 374 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 FAM234AQ9H0X4 552 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 P2RY12Q9H244 342 aa13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
CSNK1D-217ENST00000581241 HS3ST2Q9Y278 367 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms