RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 OR6M1Q8NGM8 313 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 MYOTQ9UBF9 498 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 TMEM184BQ9Y519 407 aaPredicted RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ZC3H12DA2A288 527 aaKnown RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 MTHFD2P13995 350 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 FOLR1P15328 257 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ENPP1P22413 925 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 PTBP1P26599 531 aaKnown RBP eCLIP19.63■□□□□ 0.731e-6■■■■□ 20.5
PTPRM-211ENST00000580170 GP2P55259 537 aaKnown RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 SOWAHCQ53LP3 525 aaPredicted RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ACER3Q9NUN7 267 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 CSNK1EP49674 416 aaKnown RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 HBG1P69891 147 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 HBG2P69892 147 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 C17orf107Q6ZR85 190 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 PIGTQ969N2 578 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 STACQ99469 402 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 ZBP1Q9H171 429 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 DYNLRB1Q9NP97 96 aa19.63■□□□□ 0.73
PTPRM-211ENST00000580170 EXO1Q9UQ84 846 aaKnown RBP19.63■□□□□ 0.73
PTPRM-211ENST00000580170 S100A8P05109 93 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 HSD17B7P56937 341 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 GLYR1Q49A26 553 aaPredicted RBP19.62■□□□□ 0.73
PTPRM-211ENST00000580170 GLIPR1L1Q6UWM5 242 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 NANPQ8TBE9 248 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 SLC6A17Q9H1V8 727 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 CALHM2Q9HA72 323 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 THAP10Q9P2Z0 257 aaPredicted RBP19.62■□□□□ 0.73
PTPRM-211ENST00000580170 MMACHCQ9Y4U1 282 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 RD3LP0DJH9 198 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 NPY4RP50391 375 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 CARD18P57730 90 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 HNF4GQ14541 408 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 NLRC3Q7RTR2 1065 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 OR4A16Q8NH70 328 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 HRASLSQ9HDD0 168 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 ATP13A2Q9NQ11 1180 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 CLDN1O95832 211 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 LGI1O95970 557 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 FAM199XQ6PEV8 388 aaPredicted RBP19.62■□□□□ 0.73
PTPRM-211ENST00000580170 TOX2Q96NM4 488 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 DHRS9Q9BPW9 319 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 OCEL1Q9H607 264 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 FN3KRPQ9HA64 309 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 F2RL1P55085 397 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 IAH1Q2TAA2 248 aaPredicted RBP19.62■□□□□ 0.73
PTPRM-211ENST00000580170 VHLLQ6RSH7 139 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 TMEM217Q8N7C4 229 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 ZNF768Q9H5H4 540 aaKnown RBP19.62■□□□□ 0.73
PTPRM-211ENST00000580170 KIR3DX1Q9H7L2 352 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 EXOSC3Q9NQT5 275 aaKnown RBP19.62■□□□□ 0.73
PTPRM-211ENST00000580170 NECAP2Q9NVZ3 263 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 GPR160Q9UJ42 338 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 FBXL4Q9UKA2 621 aa19.62■□□□□ 0.73
PTPRM-211ENST00000580170 DFFBO76075 338 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 OVCH1Q7RTY7 1134 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 PDCD1LG2Q9BQ51 273 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 ABHD6Q9BV23 337 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 SLC39A9Q9NUM3 307 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 CORINQ9Y5Q5 1042 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 CBY3A6NI87 242 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 A8MVM7 634 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 OR13C7P0DN81 318 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 CPN1P15169 458 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 LAP3P28838 519 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 DCAF12Q5T6F0 453 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 LINC00299Q6ZSB3 139 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 C1orf87Q8N0U7 546 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 PIGQQ9BRB3 760 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 GABARAPL1Q9H0R8 117 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 ZNF629Q9UEG4 869 aaPredicted RBP19.61■□□□□ 0.73
PTPRM-211ENST00000580170 HMGN4O00479 90 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 GLSO94925 669 aaPredicted RBP19.61■□□□□ 0.73
PTPRM-211ENST00000580170 SPI1P17947 270 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 MRPL19P49406 292 aaKnown RBP19.61■□□□□ 0.73
PTPRM-211ENST00000580170 ACOXLQ9NUZ1 547 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 CGGBP1Q9UFW8 167 aaPredicted RBP19.61■□□□□ 0.73
PTPRM-211ENST00000580170 PIGLQ9Y2B2 252 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 CHD4Q14839 1912 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 ANKLE1Q8NAG6 615 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 AGBL5Q8NDL9 886 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 TMEM129A0AVI4 362 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 H7C1Q1 480 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 HSD17B6O14756 317 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 CYB5BO43169 146 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 PNPP00491 289 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 THBS3P49746 956 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 AKR1C1Q04828 323 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 ADIRFQ15847 76 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 DUSP5Q16690 384 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 C1orf140Q5VVS0 124 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 ADGRF3Q8IZF5 1079 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 OR51S1Q8NGJ8 323 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 TEAD3Q99594 435 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 UTP23Q9BRU9 249 aaKnown RBP19.61■□□□□ 0.73
PTPRM-211ENST00000580170 MYO10Q9HD67 2058 aa19.61■□□□□ 0.73
PTPRM-211ENST00000580170 DDX60Q8IY21 1712 aaKnown RBP19.6■□□□□ 0.73
PTPRM-211ENST00000580170 K7ESM1 405 aa19.6■□□□□ 0.73
PTPRM-211ENST00000580170 ABLIM3O94929 683 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms