RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 MYBPC1Q00872 1141 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 TOP3AQ13472 1001 aaPredicted RBP10.85□□□□□ -0.67
RARA-208ENST00000577646 TBRG1Q3YBR2 411 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 KDM4DQ6B0I6 523 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 SLC27A4Q6P1M0 643 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 LINGO2Q7L985 606 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 AMIGO2Q86SJ2 522 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 SYT9Q86SS6 491 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 IGFN1Q86VF2 1251 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 JAZF1Q86VZ6 243 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 PQLC1Q8N2U9 271 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 SYT14Q8NB59 555 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 FOXB1Q99853 325 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 C9orf16Q9BUW7 83 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 PRRG3Q9BZD7 231 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 KCNN2Q9H2S1 579 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 ESRP2Q9H6T0 727 aaKnown RBP10.85□□□□□ -0.67
RARA-208ENST00000577646 SIAEQ9HAT2 523 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 KRT84Q9NSB2 600 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 TBC1D23Q9NUY8 699 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 EDARQ9UNE0 448 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 SLC25A15Q9Y619 301 aa10.85□□□□□ -0.67
RARA-208ENST00000577646 TEX13CA0A0J9YWL9 993 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 H3BN98 237 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 KHDRBS3O75525 346 aaKnown RBP10.84□□□□□ -0.67
RARA-208ENST00000577646 UBL3O95164 117 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 PPP1R3DO95685 299 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 TP53P04637 393 aaPredicted RBP10.84□□□□□ -0.67
RARA-208ENST00000577646 THBDP07204 575 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 PRKACGP22612 351 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 PTAFRP25105 342 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 ARR3P36575 388 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 PTDSS1P48651 473 aaKnown RBP10.84□□□□□ -0.67
RARA-208ENST00000577646 DAPP51397 102 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 BLVRAP53004 296 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 LGALS3BPQ08380 585 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 MESTQ5EB52 335 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 PHYHD1Q5SRE7 291 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 FAM27BQ5VT28 67 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 ANKRD34AQ69YU3 496 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 TMEM108Q6UXF1 575 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 ZNF813Q6ZN06 617 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 SLC22A24Q8N4F4 322 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 PKP2Q99959 881 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 EGLN3Q9H6Z9 239 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 DCLRE1BQ9H816 532 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 SLC25A19Q9HC21 320 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 USE1Q9NZ43 259 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 OAZ3Q9UMX2 235 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 ORC6Q9Y5N6 252 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 FKBP7Q9Y680 259 aa10.84□□□□□ -0.67
RARA-208ENST00000577646 RIIAD1A6NNX1 92 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 SOCS2O14508 198 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 PTHP01270 115 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 CBR1P16152 277 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 HIST1H1CP16403 213 aaKnown RBP10.83□□□□□ -0.68
RARA-208ENST00000577646 CDKN2AP42771 156 aaKnown RBP10.83□□□□□ -0.68
RARA-208ENST00000577646 CRISP1P54107 249 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 RAD23AP54725 363 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 FOXG1P55316 489 aaPredicted RBP10.83□□□□□ -0.68
RARA-208ENST00000577646 PCBD1P61457 104 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 LSM6P62312 80 aaKnown RBP10.83□□□□□ -0.68
RARA-208ENST00000577646 PPP2R2BQ00005 443 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 CDK5Q00535 292 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 SLC36A2Q495M3 483 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 SLC36A3Q495N2 470 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 ZBTB46Q86UZ6 589 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 LSRQ86X29 649 aaPredicted RBP10.83□□□□□ -0.68
RARA-208ENST00000577646 GLB1L2Q8IW92 636 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 OR2T4Q8NH00 348 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 RACGAP1Q9H0H5 632 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 NELFAQ9H3P2 528 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 C1orf198Q9H425 327 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 CMC2Q9NRP2 79 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 CRNNQ9UBG3 495 aaPredicted RBP10.83□□□□□ -0.68
RARA-208ENST00000577646 IL20RAQ9UHF4 553 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 FBN2P35556 2912 aa10.83□□□□□ -0.68
RARA-208ENST00000577646 CTAG2O75638 210 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 HRGP04196 525 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 CST2P09228 141 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 ZNF3P17036 446 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 PAICSP22234 425 aaKnown RBP10.82□□□□□ -0.68
RARA-208ENST00000577646 IGFBP5P24593 272 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 LAP3P28838 519 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 ALDH3A2P51648 485 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 SLC25A1P53007 311 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 GLO1Q04760 184 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.82□□□□□ -0.68
RARA-208ENST00000577646 GINS1Q14691 196 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 TSC22D1Q15714 1073 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 PGGHGQ32M88 737 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 HIKESHIQ53FT3 197 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 CLEC12AQ5QGZ9 265 aa10.82□□□□□ -0.68
RARA-208ENST00000577646 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
RARA-208ENST00000577646 NCMAPQ5T1S8 102 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms