RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PNMTP11086 282 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ELK1P19419 428 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 MST1P26927 711 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 HTR1FP30939 366 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 SLC6A8P48029 635 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 FOXK2Q01167 660 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 FABP5Q01469 135 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ZNF117Q03924 483 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 C16orf47Q6ZP98 133 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 ATG4DQ86TL0 474 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 CPOQ8IVL8 374 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 GID4Q8IVV7 300 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 NUBPLQ8TB37 319 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 HSD17B8Q92506 261 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ZNF524Q96C55 264 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 TNFRSF13CQ96RJ3 184 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ZNF251Q9BRH9 671 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ACTR6Q9GZN1 396 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 NXT1Q9UKK6 140 aaKnown RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 TRBV11-1A0A0K0K1C0 115 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 PLSCR5A0PG75 271 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 TRABD2BA6NFA1 517 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 TMEM200CA6NKL6 621 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 POM121CA8CG34 1229 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 B4E171 279 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ZNF354AO60765 605 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 KLK3P07288 261 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 CXCL2P19875 107 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 SLC6A6P31641 620 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ETV5P41161 510 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 TSPAN7P41732 249 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 DEFA5Q01523 94 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 Q3ZCU0 254 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 MARCH3Q86UD3 253 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 BBS1Q8NFJ9 593 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 THAP3Q8WTV1 239 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 MR1Q95460 341 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 ELMOD3Q96FG2 381 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 DDOQ99489 341 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 H2AFY2Q9P0M6 372 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 C19orf25Q9UFG5 118 aaPredicted RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 EXOSC1Q9Y3B2 195 aaKnown RBP12.49□□□□□ -0.41
RNF43-202ENST00000577625 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 TMEM129A0AVI4 362 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
RNF43-202ENST00000577625 SGCEO43556 437 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 FADS1O60427 444 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
RNF43-202ENST00000577625 KDM4BO94953 1096 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 TFPIP10646 304 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 POU3F2P20265 443 aaPredicted RBP12.48□□□□□ -0.41
RNF43-202ENST00000577625 RBMS1P29558 406 aaKnown RBP12.48□□□□□ -0.41
RNF43-202ENST00000577625 SELENOPP49908 381 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 ARHGDIBP52566 201 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 NRG3P56975 720 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 SLC26A5P58743 744 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 FCRLBQ6BAA4 426 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 SEZ6L2Q6UXD5 910 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 LRRC28Q86X40 367 aaPredicted RBP12.48□□□□□ -0.41
RNF43-202ENST00000577625 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 NANPQ8TBE9 248 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 CMKLR1Q99788 373 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 TBL1XR1Q9BZK7 514 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 CYSLTR2Q9NS75 346 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
RNF43-202ENST00000577625 NPFFR2Q9Y5X5 522 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 B3GALT1Q9Y5Z6 326 aa12.48□□□□□ -0.41
RNF43-202ENST00000577625 A0A1B0GW55 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 FAM183AA6NL82 134 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ANXA2P2A6NMY6 339 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ADAM10O14672 748 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 HCRTR2O43614 444 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 RP2O75695 350 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ALDOBP05062 364 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 DUX4L2P0CJ85 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 DUX4L3P0CJ86 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 DUX4L4P0CJ87 422 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 DUX4L5P0CJ88 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 DUX4L6P0CJ89 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 DUX4L7P0CJ90 424 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 RAB3BP20337 219 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 EIF1P41567 113 aaKnown RBP12.47□□□□□ -0.41
RNF43-202ENST00000577625 SLC1A3P43003 542 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 MICBQ29980 383 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 NIPAL3Q6P499 406 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 PLBD1Q6P4A8 553 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 C5orf46Q6UWT4 87 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 BTN2A1Q7KYR7 527 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 OR5M3Q8NGP4 307 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 SFT2D1Q8WV19 159 aa12.47□□□□□ -0.41
RNF43-202ENST00000577625 ZNF275Q9NSD4 429 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms