RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CCL2P13500 99 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 MAKP20794 623 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 MDKP21741 143 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 MMP15P51511 669 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 BIDP55957 195 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 HSF2Q03933 536 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 GLO1Q04760 184 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 IFFO1Q0D2I5 559 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 TMEM155Q4W5P6 130 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 RPS26P11Q5JNZ5 115 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 KLF17Q5JT82 389 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 FAM205BPQ63HN1 556 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 BTNL3Q6UXE8 466 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 LRRN1Q6UXK5 716 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 MSANTD1Q6ZTZ1 278 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 KRT73Q86Y46 540 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 BCL6BQ8N143 479 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 PAQR4Q8N4S7 273 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 RBM15BQ8NDT2 890 aaKnown RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 BHLHE22Q8NFJ8 381 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 OR4K5Q8NGD3 323 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 OR52E2Q8NGJ4 325 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 OR5J2Q8NH18 312 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 FGFBP3Q8TAT2 258 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 UBE2FQ969M7 185 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 SLC25A44Q96H78 314 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 ITCHQ96J02 903 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 ZNF48Q96MX3 618 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 PKP2Q99959 881 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 SH3GL3Q99963 347 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 TMEM43Q9BTV4 400 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 NUF2Q9BZD4 464 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 ROPN1BQ9BZX4 212 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 OR51B6Q9H340 312 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 ROPN1Q9HAT0 212 aaPredicted RBP7.61□□□□□ -1.19
SMG6-218ENST00000575454 MMP26Q9NRE1 261 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 OR5V1Q9UGF6 321 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 LGALS13Q9UHV8 139 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 SLC13A4Q9UKG4 626 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 INSIG2Q9Y5U4 225 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 NPTNQ9Y639 398 aa7.61□□□□□ -1.19
SMG6-218ENST00000575454 A8MXK9 166 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 H3BSA7 217 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ITM2AO43736 263 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 SERPINI2O75830 405 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 IGHG1P01857 330 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ADORA3P0DMS8 318 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 IDO1P14902 403 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 TNFSF4P23510 183 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 HTR2AP28223 471 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 IL12AP29459 219 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ETV4P43268 484 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 SLC6A9P48067 706 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 SLC1A6P48664 564 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ZNF84P51523 738 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ERVS71-1P61550 626 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 PAX8Q06710 450 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 FADDQ13158 208 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 PDCD1Q15116 288 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ESCO2Q56NI9 601 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 MBNL2Q5VZF2 373 aaKnown RBP7.6□□□□□ -1.19
SMG6-218ENST00000575454 OLFML2AQ68BL7 652 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 LRFN4Q6PJG9 635 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 DHRS4L2Q6PKH6 230 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 WDR88Q6ZMY6 472 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 SLC35D2Q76EJ3 337 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 ZNF771Q7L3S4 317 aaPredicted RBP7.6□□□□□ -1.19
SMG6-218ENST00000575454 ZER1Q7Z7L7 766 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 LRRC28Q86X40 367 aaPredicted RBP7.6□□□□□ -1.19
SMG6-218ENST00000575454 HIPK4Q8NE63 616 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 THOC1Q96FV9 657 aaKnown RBP7.6□□□□□ -1.19
SMG6-218ENST00000575454 NANOGQ9H9S0 305 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 PATZ1Q9HBE1 687 aaKnown RBP7.6□□□□□ -1.19
SMG6-218ENST00000575454 EGFL7Q9UHF1 273 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 HAO1Q9UJM8 370 aa7.6□□□□□ -1.19
SMG6-218ENST00000575454 A0A0B4J2E0 115 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 A0A1B0GX12 115 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 CENPBD1B2RD01 187 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 TRAPPC2LH3BP13 241 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 SURF4O15260 269 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 RNF13O43567 381 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 TYROBPO43914 113 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 SERPINB7O75635 380 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 NDUFA7O95182 113 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 IGHV2-70P01814 119 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 HIST1H2ABP04908 130 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 QDPRP09417 244 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 ALDOCP09972 364 aaKnown RBP7.59□□□□□ -1.19
SMG6-218ENST00000575454 BMP2P12643 396 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 TNFRSF1AP19438 455 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 CCNOP22674 350 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 STOMP27105 288 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 RAG2P55895 527 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 BPIFB3P59826 476 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 RGNQ15493 299 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 OR1Q1Q15612 314 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 FBLN7Q53RD9 439 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 C6orf10Q5SRN2 563 aa7.59□□□□□ -1.19
SMG6-218ENST00000575454 THEM4Q5T1C6 240 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms