RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 ZNF75CPQ92670 426 aaPredicted RBP4.32□□□□□ -1.72
TRIM25-208ENST00000574234 BCL2L2Q92843 193 aaPredicted RBP4.32□□□□□ -1.72
TRIM25-208ENST00000574234 UBE2E3Q969T4 207 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 ANKRD27Q96NW4 1050 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 MS4A10Q96PG2 267 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 KCNS3Q9BQ31 491 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 CENPKQ9BS16 269 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 TMEM79Q9BSE2 394 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 C1QTNF6Q9BXI9 259 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 ZNF717Q9BY31 904 aaPredicted RBP4.32□□□□□ -1.72
TRIM25-208ENST00000574234 DDX31Q9H8H2 851 aaKnown RBP4.32□□□□□ -1.72
TRIM25-208ENST00000574234 DYNLRB1Q9NP97 96 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 SLC17A5Q9NRA2 495 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 FAM120CQ9NX05 1096 aaKnown RBP4.32□□□□□ -1.72
TRIM25-208ENST00000574234 OR14J1Q9UGF5 321 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 VDAC3Q9Y277 283 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 U3KQK5 164 aa4.32□□□□□ -1.72
TRIM25-208ENST00000574234 IGHV1-18A0A0C4DH31 117 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 K7EPI3 171 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 KIF2AO00139 706 aaPredicted RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 PDLIM1O00151 329 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 SAP18O00422 153 aaKnown RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ST8SIA3O43173 380 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 TRAF3IP2O43734 574 aaPredicted RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 RLN1P04808 185 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ADRA2AP08913 450 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 PPIAL4GP0DN37 164 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 CCNA2P20248 432 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 FEN1P39748 380 aaKnown RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 CETN2P41208 172 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 EIF1P41567 113 aaKnown RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 SELENOPP49908 381 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ZNF75DP51815 510 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 RAP1GDS1P52306 607 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 PRPS1P60891 318 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 TGFBR3Q03167 851 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 STX5Q13190 355 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 EXOSC7Q15024 291 aaKnown RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 PLPPR5Q32ZL2 321 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 AARDQ4LEZ3 155 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 RNASEH2BQ5TBB1 312 aaKnown RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 HIST2H2AA3Q6FI13 130 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 C11orf63Q6NUN7 778 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 TMEM182Q6ZP80 229 aaPredicted RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ANKRD13BQ86YJ7 626 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 WDFY1Q8IWB7 410 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 SAMD14Q8IZD0 417 aaPredicted RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 CEP112Q8N8E3 955 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 NOA1Q8NC60 698 aaKnown RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 OR52R1Q8NGF1 315 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 WDR20Q8TBZ3 569 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ST7LQ8TDW4 575 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 LINC00476Q8WZB0 136 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 DYRK2Q92630 601 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 EFHD2Q96C19 240 aaPredicted RBP4.31□□□□□ -1.72
TRIM25-208ENST00000574234 RNF145Q96MT1 663 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 VSTM2LQ96N03 204 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 SERPINB12Q96P63 405 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 SLC38A2Q96QD8 506 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 TSGA10Q9BZW7 698 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 KCNN2Q9H2S1 579 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 ZNF385DQ9H6B1 395 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 SPAG4Q9NPE6 437 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 CYSLTR2Q9NS75 346 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 RAP2CQ9Y3L5 183 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 OARD1Q9Y530 152 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
TRIM25-208ENST00000574234 IGKV3D-15A0A087WSY6 115 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 DPPA5A6NC42 116 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SDR42E2A6NKP2 422 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 M0R233 179 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 RHODO00212 210 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SYNGR3O43761 229 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SELENOFO60613 162 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 FOXH1O75593 365 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 JTBO76095 146 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 ESRRBO95718 433 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 OPN1LWP04000 364 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SFTPBP07988 381 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 MYZAPP0CAP1 466 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 EEF1B2P24534 225 aaKnown RBP4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SHC1P29353 583 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 TNFSF8P32971 234 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SFTPDP35247 375 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 WNT5AP41221 380 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 GDF5P43026 501 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 SARNPP82979 210 aaKnown RBP4.3□□□□□ -1.72
TRIM25-208ENST00000574234 CDK16Q00536 496 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 NAAAQ02083 359 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 ZNF154Q13106 437 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 DHX34Q14147 1143 aaKnown RBP4.3□□□□□ -1.72
TRIM25-208ENST00000574234 MELKQ14680 651 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 PDK3Q15120 406 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 ANKDD1AQ495B1 522 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 TRMT12Q53H54 448 aaKnown RBP4.3□□□□□ -1.72
TRIM25-208ENST00000574234 DEFB121Q5J5C9 76 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 ETFRF1Q6IPR1 90 aa4.3□□□□□ -1.72
TRIM25-208ENST00000574234 METTL2BQ6P1Q9 378 aaKnown RBP4.3□□□□□ -1.72
TRIM25-208ENST00000574234 NPSR1Q6W5P4 371 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms