RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RAB1AP62820 205 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 ALG10Q5BKT4 473 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 C6orf52Q5T4I8 152 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 KRT80Q6KB66 452 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 MBOAT2Q6ZWT7 520 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 FKBP9P1Q75LS8 142 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 NRMQ8IXM6 262 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 SVOPLQ8N434 492 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 PAQR4Q8N4S7 273 aaPredicted RBP14.91□□□□□ -0.02
SMG6-212ENST00000573153 RBM15BQ8NDT2 890 aaKnown RBP14.91□□□□□ -0.02
SMG6-212ENST00000573153 HDAC2Q92769 488 aaKnown RBP14.91□□□□□ -0.02
SMG6-212ENST00000573153 FAM162AQ96A26 154 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 NABP1Q96AH0 204 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 KCNK17Q96T54 332 aa14.91□□□□□ -0.02
SMG6-212ENST00000573153 MRPL37Q9BZE1 423 aaKnown RBP14.91□□□□□ -0.02
SMG6-212ENST00000573153 IGHV4-61A0A0C4DH41 118 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 A0A1W2PRQ8 180 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 hCG_2039718K7EN88 272 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 DCTN3O75935 186 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 RAB36O95755 333 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 CSF3P09919 207 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 NR2C1P13056 603 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 NCK1P16333 377 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 ZNF26P17031 533 aaPredicted RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 NPR2P20594 1047 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 YAP1P46937 504 aaKnown RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 PTDSS1P48651 473 aaKnown RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 MYBPC1Q00872 1141 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 DAG1Q14118 895 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 DGCR6Q14129 220 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 RAB39AQ14964 217 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 LAPTM4AQ15012 233 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 SPATS1Q496A3 300 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 FAM205BPQ63HN1 556 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 GLYATQ6IB77 296 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 TMPRSS11FQ6ZWK6 438 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 CYP4Z1Q86W10 505 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 PGAM4Q8N0Y7 254 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 MRPL24Q96A35 216 aaKnown RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 C7orf34Q96L11 122 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 LRRC37BQ96QE4 947 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 MDFIQ99750 246 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 SH3GL3Q99963 347 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 ALG12Q9BV10 488 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 NMNAT1Q9HAN9 279 aaPredicted RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 MYEF2Q9P2K5 600 aaKnown RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 RHCGQ9UBD6 479 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 CD300AQ9UGN4 299 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 TAGLN3Q9UI15 199 aa14.9□□□□□ -0.02
SMG6-212ENST00000573153 SAMD4AQ9UPU9 718 aaKnown RBP14.9□□□□□ -0.02
SMG6-212ENST00000573153 VSTM5A8MXK1 200 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 FARS2O95363 451 aaKnown RBP14.89□□□□□ -0.03
SMG6-212ENST00000573153 SERPINA5P05154 406 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 RHCEP18577 417 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 NR4A2P43354 598 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 EVX1P49640 407 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 ZNF84P51523 738 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 RPL27P61353 136 aaKnown RBP14.89□□□□□ -0.03
SMG6-212ENST00000573153 MRPS34P82930 218 aaKnown RBP14.89□□□□□ -0.03
SMG6-212ENST00000573153 PPP2R2BQ00005 443 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 IQCCQ4KMZ1 466 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 LRP11Q86VZ4 500 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 MEX3DQ86XN8 651 aaKnown RBP14.89□□□□□ -0.03
SMG6-212ENST00000573153 HIPK1Q86Z02 1210 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 OR4K5Q8NGD3 323 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 FNDC8Q8TC99 324 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 SLC7A13Q8TCU3 470 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 DHRS1Q96LJ7 313 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 SOX7Q9BT81 388 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 ADA2Q9NZK5 511 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 NDUFAF4Q9P032 175 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 EGFL7Q9UHF1 273 aa14.89□□□□□ -0.03
SMG6-212ENST00000573153 CDC42EP2O14613 210 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SLC2A10O95528 541 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SEMG1P04279 462 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SAGP10523 405 aaPredicted RBP14.88□□□□□ -0.03
SMG6-212ENST00000573153 GLRXP35754 106 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 FMODQ06828 376 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 TMEM255AQ5JRV8 349 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SAMD4BQ5PRF9 694 aaKnown RBP14.88□□□□□ -0.03
SMG6-212ENST00000573153 SLC25A47Q6Q0C1 308 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 ZNF730Q6ZMV8 503 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 OAFQ86UD1 273 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 CLDN22Q8N7P3 220 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SYT14Q8NB59 555 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 ZNF519Q8TB69 540 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 FOXN4Q96NZ1 517 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 C1orf198Q9H425 327 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SIAEQ9HAT2 523 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 MYOZ1Q9NP98 299 aaPredicted RBP14.88□□□□□ -0.03
SMG6-212ENST00000573153 ARL8BQ9NVJ2 186 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 NDE1Q9NXR1 346 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 MAGEL2Q9UJ55 1249 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 TMEM5Q9Y2B1 443 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 SPEF1Q9Y4P9 236 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 FKBP7Q9Y680 259 aa14.88□□□□□ -0.03
SMG6-212ENST00000573153 MALRD1Q5VYJ5 2156 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 EFCAB9A8MZ26 197 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 NDUFS8O00217 210 aa14.87□□□□□ -0.03
SMG6-212ENST00000573153 GMNNO75496 209 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms