RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CTU2Q2VPK5 515 aaKnown RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF311Q5JNZ3 666 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 WLSQ5T9L3 541 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 IGFL4Q6B9Z1 124 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 TMEM205Q6UW68 189 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF517Q6ZMY9 492 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 FRRS1Q6ZNA5 592 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 Q75L30 129 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 RANBP3LQ86VV4 465 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 GRAMD2AQ8IUY3 354 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 FAM86B1Q8N7N1 296 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF615Q8N8J6 731 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 B3GNT7Q8NFL0 401 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 OR5L2Q8NGL0 311 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 OR5R1Q8NH85 324 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 C16orf52Q8NHV5 167 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CDS1Q92903 461 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 C16orf58Q96GQ5 468 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 SENP5Q96HI0 755 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 TXNDC15Q96J42 360 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 C7orf34Q96L11 122 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF300Q96RE9 604 aaPredicted RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 SDF2Q99470 211 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 LPAR4Q99677 370 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 PSD2Q9BQI7 771 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 OSBPL11Q9BXB4 747 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 SLC38A1Q9H2H9 487 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ANKRD19PQ9H560 264 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 PNO1Q9NRX1 252 aaKnown RBP6.31□□□□□ -1.4
CNOT1-222ENST00000570139 P4HTMQ9NXG6 502 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 CTSFQ9UBX1 484 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 C3orf18Q9UK00 162 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ERVK-19Q9WJR5 959 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 OR10H1Q9Y4A9 318 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 ENPP4Q9Y6X5 453 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 FRYLO94915 3013 aa6.31□□□□□ -1.4
CNOT1-222ENST00000570139 A0A1W2PQ72 361 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 C21orf140B9A014 251 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 NME6O75414 186 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 UGT2B17O75795 530 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 KCNK2O95069 426 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 OXSR1O95747 527 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 LGI1O95970 557 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 C1QCP02747 245 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 OPN1SWP03999 348 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 THRBP10828 461 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ANXA8P13928 327 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 UQCRBP14927 111 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 AREGP15514 252 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF26P17031 533 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 GABRA3P34903 492 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 PTGER4P35408 488 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 TMED10P49755 219 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ELLP55199 621 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 MED21Q13503 144 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 EXOSC7Q15024 291 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 DAZAP2Q15038 168 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 NCF4Q15080 339 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 EXT1Q16394 746 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 NRF1Q16656 503 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 SYT14P1Q58G82 188 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 VWA2Q5GFL6 755 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 LPCAT4Q643R3 524 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF704Q6ZNC4 412 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 CPEB2Q7Z5Q1 589 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ANKRD37Q7Z713 158 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 VTCN1Q7Z7D3 282 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 TMPRSS12Q86WS5 348 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 COMMD2Q86X83 199 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF440Q8IYI8 595 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 DND1Q8IYX4 353 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 CBR4Q8N4T8 237 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF540Q8NDQ6 660 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 OR2Y1Q8NGV0 311 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 OR52P1PQ8NH57 321 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 OR52I2Q8NH67 350 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 NUBPLQ8TB37 319 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 FAM110BQ8TC76 370 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF721Q8TF20 911 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 PHF10Q8WUB8 498 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 APOBEC4Q8WW27 367 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 TSLPQ969D9 159 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 TMBIM1Q969X1 311 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 TMEM186Q96B77 213 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 NAF1Q96HR8 494 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ARHGDIGQ99819 225 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 CIB1Q99828 191 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 PRRG4Q9BZD6 226 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 APMAPQ9HDC9 416 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 Q9N2K0 584 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 SMPD3Q9NY59 655 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 ZNF443Q9Y2A4 671 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 SLC35A3Q9Y2D2 325 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 SH3GLB1Q9Y371 365 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 SAMHD1Q9Y3Z3 626 aaKnown RBP6.3□□□□□ -1.4
CNOT1-222ENST00000570139 RP1P56715 2156 aa6.3□□□□□ -1.4
CNOT1-222ENST00000570139 GON4LQ3T8J9 2241 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms