RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 BDP1A6H8Y1 2624 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 RP1P56715 2156 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FRYLO94915 3013 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 IGHV1-45A0A0A0MS14 117 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 A0A1W2PNV4 684 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 LIPT2A6NK58 231 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM212A6NML5 194 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 IFITM5A6NNB3 132 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 C4orf47A7E2U8 309 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 C17orf51A8MQB3 221 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FAM171A2A8MVW0 826 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FAM25AB3EWG3 89 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FAM25CB3EWG5 89 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FAM25GB3EWG6 89 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 B4DXG7 233 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 BOLA2-SMG1P6H3BVE0 249 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 AIPO00170 330 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 GPR171O14626 319 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 TP53I11O14683 189 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 GSTZ1O43708 216 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF254O75437 659 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ITGA10O75578 1167 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR2J2O76002 312 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 AQP8O94778 261 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 AKR7A3O95154 331 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 UBL3O95164 117 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 LDOC1O95751 146 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 HRGP04196 525 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 UMODP07911 640 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 CALCBP10092 127 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PRKAR1AP10644 381 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ATF1P18846 271 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MAPK3P27361 379 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 CCKBRP32239 447 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 TALDO1P37837 337 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MPLP40238 635 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PSMB10P40306 273 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MNDAP41218 407 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 CASP3P42574 277 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 KIR2DL3P43628 341 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 DAP3P51398 398 aaKnown RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FOXL2P58012 376 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR10A3P58181 314 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 GPR85P60893 370 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 BTG1P62324 171 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PITPNAQ00169 270 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 RASGEF1BQ0VAM2 473 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 IL18Q14116 193 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PCOLCEQ15113 449 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 P2RY14Q15391 338 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 LPAL2Q16609 132 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PLPPR5Q32ZL2 321 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SLC25A35Q3KQZ1 300 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 Q499Y3 187 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PHF19Q5T6S3 580 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 TRIQKQ629K1 86 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SLC18B1Q6NT16 456 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF544Q6NX49 715 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OPN5Q6U736 354 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ARSKQ6UWY0 536 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 FAM220AQ7Z4H9 259 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF679Q8IYX0 411 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 YIPF7Q8N8F6 280 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SAMD12Q8N8I0 201 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR2M3Q8NG83 312 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR4M1Q8NGD0 313 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR2Y1Q8NGV0 311 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR5AK2Q8NH90 309 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF417Q8TAU3 575 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 POC1BQ8TC44 478 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 RNF128Q8TEB7 428 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ASB10Q8WXI3 467 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 RGP1Q92546 391 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MCHR2Q969V1 340 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 C8orf44Q96CB5 159 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 NXPE2Q96DL1 559 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SPACA9Q96E40 222 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF837Q96EG3 531 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 RASL10BQ96S79 203 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ABHD1Q96SE0 405 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF587Q96SQ5 575 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PDCD1LG2Q9BQ51 273 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MESP1Q9BRJ9 268 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MARVELD1Q9BSK0 173 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 THAP7Q9BT49 309 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 WACQ9BTA9 647 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ANGPTL4Q9BY76 406 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MRPL13Q9BYD1 178 aaKnown RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 OR11A1Q9GZK7 315 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SYT4Q9H2B2 425 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 CCDC86Q9H6F5 360 aaKnown RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 AKIRIN1Q9H9L7 192 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SH2D2AQ9NP31 389 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 CHST11Q9NPF2 352 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 NOX4Q9NPH5 578 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 SERINC1Q9NRX5 453 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 MRPL22Q9NWU5 206 aaKnown RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ANKRD10Q9NXR5 420 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ALKBH4Q9NXW9 302 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 EXTL2Q9UBQ6 330 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms