RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 FGF1P05230 155 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 HSMCR30P0CW71 290 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 TCN1P20061 433 aaPredicted RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 GLRA2P23416 452 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 PAX7P23759 505 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 LAP3P28838 519 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 RPL13AP40429 203 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 SSR1P43307 286 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 GSSP48637 474 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 GPM6BQ13491 265 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 AQP6Q13520 282 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 NADK2Q4G0N4 442 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 ANGPTL8Q6UXH0 198 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 TRIM69Q86WT6 500 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 RIMKLAQ8IXN7 391 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 ZNF683Q8IZ20 524 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 SLC38A6Q8IZM9 456 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 ZCCHC7Q8N3Z6 543 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 MREGQ8N565 214 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 EIF1ADQ8N9N8 165 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 NOXO1Q8NFA2 376 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 CCDC148Q8NFR7 591 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 OR8J1Q8NGP2 316 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 LKAAEAR1Q8TD35 194 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 PYROXD1Q8WU10 500 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 ZCCHC13Q8WW36 166 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 MAIP1Q8WWC4 291 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 GEMIN6Q8WXD5 167 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 NARS2Q96I59 477 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 CLCC1Q96S66 551 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 DOK1Q99704 481 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 SH3GL3Q99963 347 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 BCL7BQ9BQE9 202 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 OSBPL10Q9BXB5 764 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 NCOR1P1Q9H4R4 102 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 UGT1A7Q9HAW7 530 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 UGT1A10Q9HAW8 530 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 UGT1A8Q9HAW9 530 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 RPRD1BQ9NQG5 326 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 FARSBQ9NSD9 589 aaKnown RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 UFSP2Q9NUQ7 469 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 COX16Q9P0S2 106 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 MMP17Q9ULZ9 603 aa1.39□□□□□ -2.19
UBR1-209ENST00000569243 CAB39Q9Y376 341 aaPredicted RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 V9GYY5 206 aaPredicted RBP1.39□□□□□ -2.19
UBR1-209ENST00000569243 SHANK1Q9Y566 2161 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 TRAV39A0A0B4J263 110 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 A0A1B0GVI7 797 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 SERTM2A0A1B0GWG4 89 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 XKRY2A2RUG3 117 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 PCNX2A6NKB5 2137 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 OR5B21A6NL26 309 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 ZNF850A8MQ14 1090 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 M0QX08 132 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 CXCL11O14625 94 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 DNALI1O14645 258 aaPredicted RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 RAMP3O60896 148 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 DNAJB6O75190 326 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 SURF6O75683 361 aaKnown RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 RP2O75695 350 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 ATP5LO75964 103 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 IL1BP01584 269 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 EPB41P11171 864 aaKnown RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 ATP6V1C1P21283 382 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 DRD5P21918 477 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 SUB1P53999 127 aaKnown RBP eCLIP1.38□□□□□ -2.19
UBR1-209ENST00000569243 PRRX1P54821 245 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 RPS21P63220 83 aaKnown RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 IRX3P78415 501 aaPredicted RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 DDX39BQ13838 428 aaKnown RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 ZMYND11Q15326 602 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 DGUOKQ16854 277 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 CCDC152Q4G0S7 254 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 ATAD3BQ5T9A4 648 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 RIPPLY2Q5TAB7 128 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 TTC23Q5W5X9 447 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 TMEM225Q6GV28 225 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 PMF1Q6P1K2 205 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 LINC00173Q6ZV60 143 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 RUFY3Q7L099 469 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 ABHD13Q7L211 337 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 ZNF321PQ8N8H1 164 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 DRAXINQ8NBI3 349 aaPredicted RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 NECAP1Q8NC96 275 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 OR52H1Q8NGJ2 320 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 OR2T3Q8NH03 318 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 AKR7LQ8NHP1 331 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 FBXO32Q969P5 355 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 PSKH2Q96QS6 385 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 SECISBP2Q96T21 854 aaKnown RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 RNF5Q99942 180 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 FOXC2Q99958 501 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 KCTD14Q9BQ13 255 aaPredicted RBP1.38□□□□□ -2.19
UBR1-209ENST00000569243 TPPP3Q9BW30 176 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 GABARAPL3Q9BY60 117 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 RIBC2Q9H4K1 309 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 RMND5AQ9H871 391 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 C12orf10Q9HB07 376 aa1.38□□□□□ -2.19
UBR1-209ENST00000569243 ZMAT5Q9UDW3 170 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms