RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 VANGL1Q8TAA9 524 aaPredicted RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 TUBGCP3Q96CW5 907 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 ZIM3Q96PE6 472 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 SLC35A5Q9BS91 424 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 EMC6Q9BV81 110 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 GATA5Q9BWX5 397 aaPredicted RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 TRIM15Q9C019 465 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 OR51B6Q9H340 312 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 DPAGT1Q9H3H5 408 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 C16orf95Q9H693 158 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 RLIMQ9NVW2 624 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 SELENONQ9NZV5 590 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 PSMC3IPQ9P2W1 217 aaPredicted RBP7.28□□□□□ -1.24
SMG1-216ENST00000569122 EMCNQ9ULC0 261 aa7.28□□□□□ -1.24
SMG1-216ENST00000569122 A0A087WUJ7 227 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 MDFIC2A0A1B0GVS7 189 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 KRT75O95678 551 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 LIPFP07098 398 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 MELTFP08582 738 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 WNT2P09544 360 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 PATE4P0C8F1 98 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 CCL2P13500 99 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 TUBG1P23258 451 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 AHCYP23526 432 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 RBMXP38159 391 aaKnown RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 CRISP3P54108 245 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 ERVS71-1P61550 626 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 HSF2Q03933 536 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 GLO1Q04760 184 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 EGR4Q05215 589 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 PUDPQ08623 228 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 THEM4Q5T1C6 240 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 C11orf88Q6PI97 169 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 ARL9Q6T311 187 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 ANKRD46Q86W74 232 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 C10orf107Q8IVU9 208 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 LRRC34Q8IZ02 419 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 PAQR4Q8N4S7 273 aaPredicted RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 DTX3Q8N9I9 347 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 ZSCAN4Q8NAM6 433 aaPredicted RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 RBM15BQ8NDT2 890 aaKnown RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 BHLHE22Q8NFJ8 381 aaPredicted RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 DNAJA4Q8WW22 397 aaPredicted RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 GATAD2BQ8WXI9 593 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 IFT81Q8WYA0 676 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 SGCDQ92629 289 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 TAAR8Q969N4 342 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 WWC2-AS2Q96NR7 200 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 SPATA9Q9BWV2 254 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 TUBG2Q9NRH3 451 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 TMEM38BQ9NVV0 291 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 THUMPD1Q9NXG2 353 aaKnown RBP7.27□□□□□ -1.25
SMG1-216ENST00000569122 ASIC5Q9NY37 505 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 GLTPQ9NZD2 209 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 P2RX2Q9UBL9 471 aa7.27□□□□□ -1.25
SMG1-216ENST00000569122 BTBD17A6NE02 478 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 CEACAM18A8MTB9 384 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 MS4A18H0YCH9 400 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 P2RY10O00398 339 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 COPEO14579 308 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 TNFRSF13BO14836 293 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 GPR37O15354 613 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 GPR137BO60478 399 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 OR6A2O95222 327 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 PRB2P02812 416 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 RPS2P15880 293 aaKnown RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 CCNOP22674 350 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 SERPINB5P36952 375 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 ZNF84P51523 738 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 ARHGDIAP52565 204 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 CLNS1AP54105 237 aaKnown RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 PAX2Q02962 417 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 CKAP4Q07065 602 aaKnown RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 CDK5R2Q13319 367 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 CASP8Q14790 479 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 MS4A18Q3C1V0 323 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 MTX3Q5HYI7 312 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 COX20Q5RI15 118 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 SLC27A4Q6P1M0 643 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 BRD3OSQ6XYD6 125 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 ZNF836Q6ZNA1 936 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 TRMT10CQ7L0Y3 403 aaKnown RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 ZNF572Q7Z3I7 529 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 VRK2Q86Y07 508 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 POU5F2Q8N7G0 328 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 LSMEM1Q8N8F7 131 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 SPERTQ8NA61 448 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 OR4S1Q8NGB4 309 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 OR8B3Q8NGG8 313 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 OR6X1Q8NH79 312 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 KLF14Q8TD94 323 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 ZNF566Q969W8 418 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 TESCQ96BS2 214 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 NEIL1Q96FI4 390 aaPredicted RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 MARS2Q96GW9 593 aaKnown RBP7.26□□□□□ -1.25
SMG1-216ENST00000569122 SLC41A3Q96GZ6 507 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 OR8B2Q96RD0 313 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 SH3GL3Q99963 347 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 OCSTAMPQ9BR26 566 aa7.26□□□□□ -1.25
SMG1-216ENST00000569122 NUDT16L1Q9BRJ7 211 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms