RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 OR13C2Q8NGS9 318 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 ZNF519Q8TB69 540 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 ACOT11Q8WXI4 607 aaPredicted RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 HIST1H2ACQ93077 130 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 BPIFA2Q96DR5 249 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 TSPAN32Q96QS1 320 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 HOPXQ9BPY8 73 aaPredicted RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 BPESC1Q9GZL8 116 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 TXNIPQ9H3M7 391 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 SMURF2Q9HAU4 748 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 MYOZ1Q9NP98 299 aaPredicted RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 MYEF2Q9P2K5 600 aaKnown RBP6.73□□□□□ -1.33
CDH3-209ENST00000569080 RHCGQ9UBD6 479 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 FBXL3Q9UKT7 428 aa6.73□□□□□ -1.33
CDH3-209ENST00000569080 TRAV27A0A087WT01 109 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 LOC390937A0A1W2PQ73 354 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 A0A1W2PRG6 482 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 HTR3EA5X5Y0 456 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 MCIDASD6RGH6 385 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 MGRN1O60291 552 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 ZNF682O95780 498 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 SEMG1P04279 462 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 IFI30P13284 250 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 NCK1P16333 377 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 GIFP27352 417 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 PRDX6P30041 224 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 LSP1P33241 339 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 LIMS1P48059 325 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 EVX1P49640 407 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 CLRN1P58418 232 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 PSME3P61289 254 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 PRKCDQ05655 676 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 TOP3AQ13472 1001 aaPredicted RBP6.72□□□□□ -1.33
CDH3-209ENST00000569080 RIN1Q13671 783 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 TRAM2Q15035 370 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 IFI44LQ53G44 452 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 TMEM255AQ5JRV8 349 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 SLC25A47Q6Q0C1 308 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 MBOAT2Q6ZWT7 520 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 FAM122BQ7Z309 247 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 HDDC2Q7Z4H3 204 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 DPPA2Q7Z7J5 298 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 IGFN1Q86VF2 1251 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 LRP11Q86VZ4 500 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 HIPK1Q86Z02 1210 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 SLC7A13Q8TCU3 470 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 LZICQ8WZA0 190 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 DHRS1Q96LJ7 313 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 FOXN4Q96NZ1 517 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 VRK1Q99986 396 aaPredicted RBP6.72□□□□□ -1.33
CDH3-209ENST00000569080 KCTD14Q9BQ13 255 aaPredicted RBP6.72□□□□□ -1.33
CDH3-209ENST00000569080 ELAC2Q9BQ52 826 aaKnown RBP6.72□□□□□ -1.33
CDH3-209ENST00000569080 SYT3Q9BQG1 590 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 PIMREGQ9BSJ6 248 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 FUZQ9BT04 418 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 SOX7Q9BT81 388 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 ALG12Q9BV10 488 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 TPK1Q9H3S4 243 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 EFCAB1Q9HAE3 211 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 YAE1D1Q9NRH1 226 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 NDUFAF4Q9P032 175 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 STX18Q9P2W9 335 aaKnown RBP6.72□□□□□ -1.33
CDH3-209ENST00000569080 SLC7A8Q9UHI5 535 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 FBXO9Q9UK97 447 aaPredicted RBP6.72□□□□□ -1.33
CDH3-209ENST00000569080 CMAHPQ9Y471 501 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 ENPP4Q9Y6X5 453 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 STAB1Q9NY15 2570 aa6.72□□□□□ -1.33
CDH3-209ENST00000569080 IGLV3-9A0A075B6K5 115 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 A0A1W2PRQ8 180 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 A8MV72 311 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 M0R233 179 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 NDUFAB1O14561 156 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 SYNGR3O43761 229 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ICMTO60725 284 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ENTPD5O75356 428 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 NCR1O76036 304 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 FARS2O95363 451 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 STAMBPO95630 424 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 TP53P04637 393 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 ADRA2AP08913 450 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 TACSTD2P09758 323 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 SAGP10523 405 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 CCL2P13500 99 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 DAOP14920 347 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ZNF23P17027 643 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 CDAP32320 146 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ALDH3B1P43353 468 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 GPR4P46093 362 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 SLC9A3P48764 834 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 ZNF84P51523 738 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 FXYD6P3P58550 94 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 RPL27P61353 136 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 ERVS71-1P61550 626 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 RPS23P62266 143 aaKnown RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 CD47Q08722 323 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 DGCR6Q14129 220 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 GGTLC2Q14390 218 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 MAD2L1BPQ15013 274 aaPredicted RBP6.71□□□□□ -1.34
CDH3-209ENST00000569080 TAF11Q15544 211 aa6.71□□□□□ -1.34
CDH3-209ENST00000569080 SLC36A2Q495M3 483 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms