RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 C12orf66Q96MD2 445 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM218AQ96MZ4 157 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF396Q96N95 335 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 AMDHD1Q96NU7 426 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 TECTBQ96PL2 329 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF300Q96RE9 604 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 LPAR4Q99677 370 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 TRIM51Q9BSJ1 452 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 TSSK1BQ9BXA7 367 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 IQCGQ9H095 443 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 XKR8Q9H6D3 395 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 HAUS4Q9H6D7 363 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ALG9Q9H6U8 611 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FBXO8Q9NRD0 319 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 TUBG2Q9NRH3 451 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SAMSN1Q9NSI8 373 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PTTG3PQ9NZH4 202 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PDP1Q9P0J1 537 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR12D3Q9UGF7 316 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 IKZF3Q9UKT9 509 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ELF5Q9UKW6 265 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 RNF6Q9Y252 685 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PIGLQ9Y2B2 252 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 MEMO1Q9Y316 297 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 COQ4Q9Y3A0 265 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 COMMD3-BMI1R4GMX3 469 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZGRF1Q86YA3 2104 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ITPR3Q14573 2671 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 NBASA2RRP1 2371 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 HCFC1P51610 2035 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ABCA12Q86UK0 2595 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TACC2O95359 2948 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 IGLV3-10A0A075B6K4 115 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM74A7A6NL05 159 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 MPTX1A8MV57 137 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 SOCS3O14543 225 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 POLR3GO15318 223 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 SIGLEC5O15389 551 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 CFLARO15519 480 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 SPOPO43791 374 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 EFNA2O43921 213 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TSPAN2O60636 221 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 DPM1O60762 260 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TOXO94900 526 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 LCA5LO95447 670 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 YEATS4O95619 227 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TSPAN12O95859 305 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 OPN1LWP04000 364 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TROVE2P10155 538 aaKnown RBP eCLIP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 FOLR1P15328 257 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 GATA1P15976 413 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 GATA2P23769 480 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 PSMA2P25787 234 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 PPP2R1BP30154 601 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ID1P41134 155 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 GPR1P46091 355 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 OR3A2P47893 321 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 CCT3P49368 545 aaKnown RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 PLA2G16P53816 162 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 XGP55808 180 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 BDH1Q02338 343 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 GUCY2DQ02846 1103 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ASPHQ12797 758 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZP4Q12836 540 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 CALCOCO2Q13137 446 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 CHRNA6Q15825 494 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM106AQ4KMX7 169 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM74A3Q4VXF1 159 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 HIKESHIQ53FT3 197 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 FBXO48Q5FWF7 155 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 BRMS1LQ5PSV4 323 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 BEND6Q5SZJ8 279 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 PDZK1Q5T2W1 519 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 WLSQ5T9L3 541 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 OR2A2Q6IF42 318 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF343Q6P1L6 599 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 SCYL2Q6P3W7 929 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 RNASEKQ6P5S7 137 aaKnown RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 Q6ZVQ6 151 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 NCCRP1Q6ZVX7 275 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 NET1Q7Z628 596 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 KCNMB4Q86W47 210 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 STXBP6Q8NFX7 210 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 OR1L4Q8NGR5 311 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 OR6S1Q8NH40 331 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 JOSD2Q8TAC2 188 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 C11orf45Q8TAV5 145 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 GTF3AQ92664 365 aaKnown RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ISG20Q96AZ6 181 aaKnown RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 NUS1Q96E22 293 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 C9orf72Q96LT7 481 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 CHP1Q99653 195 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 NRTNQ99748 197 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 SMR3AQ99954 134 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TTYH2Q9BSA4 534 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC7A5P2Q9GIP4 190 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 ILKAPQ9H0C8 392 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 TMEM185BQ9H7F4 350 aa2.71□□□□□ -1.98
HMGB1P6-201ENST00000569046 RPS10P5Q9NQ39 176 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms