RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PIANPQ8IYJ0 282 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 FAM110BQ8TC76 370 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 C17orf50Q8WW18 174 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 FAM3DQ96BQ1 224 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 CXorf40BQ96DE9 158 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 KCNIP3Q9Y2W7 256 aa0.96□□□□□ -2.26
CDH1-211ENST00000567320 ZSWIM8A7E2V4 1837 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 A0A0B4J2A0 478 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 A8MUI8 341 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 BTNL10A8MVZ5 291 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 OVOL1O14753 267 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 HSD17B6O14756 317 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 CHADO15335 359 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 TBX19O60806 448 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 ZSCAN26Q16670 478 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 RAB12Q6IQ22 244 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 CCDC80Q76M96 950 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 ECHDC2Q86YB7 292 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 WDFY1Q8IWB7 410 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 LKAAEAR1Q8TD35 194 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 C1orf198Q9H425 327 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 BFARQ9NZS9 450 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 SHPKQ9UHJ6 478 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 SIGLEC7Q9Y286 467 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 CBY1Q9Y3M2 126 aa0.95□□□□□ -2.26
CDH1-211ENST00000567320 COL11A1P12107 1806 aaPredicted RBP0.94□□□□□ -2.26
CDH1-211ENST00000567320 OR6C70A6NIJ9 312 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 DIRAS1O95057 198 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 IGLV2-8P01709 118 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 CT62P0C5K7 136 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 ZNF688P0C7X2 276 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 QARSP47897 775 aaKnown RBP0.94□□□□□ -2.26
CDH1-211ENST00000567320 ACADVLP49748 655 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 UBE2E3Q969T4 207 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 ZNF488Q96MN9 340 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 TTC25Q96NG3 672 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 SH3GL3Q99963 347 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 RHOXF2Q9BQY4 288 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 RPF2Q9H7B2 306 aaKnown RBP0.94□□□□□ -2.26
CDH1-211ENST00000567320 ELOVL3Q9HB03 270 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 PCSK1NQ9UHG2 260 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 MOSPD1Q9UJG1 213 aa0.94□□□□□ -2.26
CDH1-211ENST00000567320 COL5A3P25940 1745 aaPredicted RBP0.94□□□□□ -2.26
CDH1-211ENST00000567320 HELZ2Q9BYK8 2649 aaKnown RBP0.94□□□□□ -2.26
CDH1-211ENST00000567320 KMT2BQ9UMN6 2715 aaPredicted RBP0.94□□□□□ -2.26
CDH1-211ENST00000567320 BAHCC1Q9P281 2608 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 RNF103-CHMP3A0A140T963 221 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 MANBAO00462 879 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 HSMCR30P0CW71 290 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 CALCBP10092 127 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 TCP1P17987 556 aaKnown RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 ARF4P18085 180 aaPredicted RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 HTR2AP28223 471 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 HRH1P35367 487 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 RPL13AP40429 203 aaKnown RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 AQP2P41181 271 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 RORCP51449 518 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 GMFBP60983 142 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 MESDQ14696 234 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 TRIM40Q6P9F5 258 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 TMEM205Q6UW68 189 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 USP50Q70EL3 339 aaPredicted RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 SNX20Q7Z614 316 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 NUDCD3Q8IVD9 361 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 CENPLQ8N0S6 344 aaPredicted RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 TMEM256Q8N2U0 113 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 KLF14Q8TD94 323 aaPredicted RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 C4orf36Q96KX1 117 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 RARRES2Q99969 163 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 SPXQ9BT56 116 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 SAV1Q9H4B6 383 aaPredicted RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 NEK6Q9HC98 313 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 RPH3ALQ9UNE2 315 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 MEMO1Q9Y316 297 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 OR10H1Q9Y4A9 318 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 HYOU1Q9Y4L1 999 aa0.93□□□□□ -2.26
CDH1-211ENST00000567320 AHDC1Q5TGY3 1603 aaPredicted RBP0.93□□□□□ -2.26
CDH1-211ENST00000567320 SF3B1O75533 1304 aaKnown RBP eCLIP0.92□□□□□ -2.26
CDH1-211ENST00000567320 SCN4AP35499 1836 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 ZNF726A6NNF4 738 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 H0YJW9 148 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 BTN3A3O00478 584 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 MRPS12O15235 138 aaKnown RBP0.92□□□□□ -2.26
CDH1-211ENST00000567320 H6PDO95479 791 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 IGKV1-16P04430 117 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 MAS1LP35410 378 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 SERPINB5P36952 375 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 CDKN1BP46527 198 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 RABIFP47224 123 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 UGT2B15P54855 530 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 OGDHQ02218 1023 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 PON2Q15165 354 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 DPYSL2Q16555 572 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 C10orf120Q5SQS8 335 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 C1orf220Q5T0J3 134 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 C1QTNF12Q5T7M4 302 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 PLET1Q6UQ28 207 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 TEX43Q6ZNM6 134 aa0.92□□□□□ -2.26
CDH1-211ENST00000567320 PUSL1Q8N0Z8 303 aaKnown RBP0.92□□□□□ -2.26
CDH1-211ENST00000567320 ZNF557Q8N988 423 aaPredicted RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms