RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 FBXO45P0C2W1 286 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 TMIGD3P0DMS9 266 aaPredicted RBP16.83■□□□□ 0.28
MSLN-207ENST00000566549 CCKBRP32239 447 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 C17orf67Q0P5P2 114 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 INPP5JQ15735 1006 aaPredicted RBP16.83■□□□□ 0.28
MSLN-207ENST00000566549 BCL2A1Q16548 175 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 Q5BKY6 102 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 LRRTM1Q86UE6 522 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 OR52I2Q8NH67 350 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 STK35Q8TDR2 534 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 GPR148Q8TDV2 347 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 DCBLD2Q96PD2 775 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 OR8B4Q96RC9 309 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 OCIAD1Q9NX40 245 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 MED29Q9NX70 200 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 ING3Q9NXR8 418 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 COLQQ9Y215 455 aaPredicted RBP16.83■□□□□ 0.28
MSLN-207ENST00000566549 RCE1Q9Y256 329 aa16.83■□□□□ 0.28
MSLN-207ENST00000566549 ANKUB1A6NFN9 424 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 TMEM212A6NML5 194 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 FTCDNL1E5RQL4 147 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 OR2T1O43869 369 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 ZNF254O75437 659 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 IFNGR1P15260 489 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 PUDPQ08623 228 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 SNTB2Q13425 540 aaKnown RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 EIF2B1Q14232 305 aaKnown RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 TCTE3Q8IZS6 198 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 MAFAQ8NHW3 353 aaPredicted RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 DACT3Q96B18 629 aaPredicted RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 PHF21AQ96BD5 680 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 MNTQ99583 582 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 TMEM185BQ9H7F4 350 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 NKIRAS2Q9NYR9 191 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 VSX1Q9NZR4 365 aaPredicted RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 KLK11Q9UBX7 282 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 FAM172BPA6NC97 362 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 RGS13O14921 159 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 SYPP08247 313 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 MFGE8Q08431 387 aaPredicted RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 KLF9Q13886 244 aaPredicted RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 SLC17A1Q14916 467 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 FCN2Q15485 313 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 SFRP4Q6FHJ7 346 aaPredicted RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 SLC18B1Q6NT16 456 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 KRT77Q7Z794 578 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 PPP1R3BQ86XI6 285 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 MISPQ8IVT2 679 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 ASCC1Q8N9N2 400 aaKnown RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 HGDQ93099 445 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 GAREM1Q9H706 876 aa16.82■□□□□ 0.28
MSLN-207ENST00000566549 MRPL39Q9NYK5 338 aaKnown RBP16.82■□□□□ 0.28
MSLN-207ENST00000566549 PHYHO14832 338 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 OR2J2O76002 312 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 DHFRP00374 187 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 POU3F1Q03052 451 aaPredicted RBP16.81■□□□□ 0.28
MSLN-207ENST00000566549 RASGEF1BQ0VAM2 473 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 TMEM69Q5SWH9 247 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 HACD4Q5VWC8 232 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 BAIAP2L2Q6UXY1 529 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 CPEB2Q7Z5Q1 589 aaKnown RBP16.81■□□□□ 0.28
MSLN-207ENST00000566549 ZNF248Q8NDW4 579 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 BEST4Q8NFU0 473 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 OR10G3Q8NGC4 313 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 OR5M1Q8NGP8 315 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 SPSB2Q99619 263 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 MS4A18H0YCH9 400 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 CDK2P24941 298 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 BTG1P62324 171 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 C19orf57Q0VDD7 668 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 MS4A18Q3C1V0 323 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 FAM205BPQ63HN1 556 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 LINC00346Q8IVM7 164 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 GLB1L2Q8IW92 636 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 ZNF679Q8IYX0 411 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 DND1Q8IYX4 353 aaKnown RBP16.81■□□□□ 0.28
MSLN-207ENST00000566549 NUBPLQ8TB37 319 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 S100A16Q96FQ6 103 aaKnown RBP16.81■□□□□ 0.28
MSLN-207ENST00000566549 C5orf34Q96MH7 638 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 ABHD6Q9BV23 337 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 KCNK15Q9H427 330 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 FOXJ3Q9UPW0 622 aa16.81■□□□□ 0.28
MSLN-207ENST00000566549 NPIPA5E9PKD4 350 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 PNLIPP16233 465 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 FAPQ12884 760 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 TMEM255AQ5JRV8 349 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 PMS2CLQ68D20 193 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 FAAP20Q6NZ36 180 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 EMC6Q9BV81 110 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 MED28Q9H204 178 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 PPP4R1LQ9P1A2 415 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 NPIPA1Q9UND3 350 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 NUBP2Q9Y5Y2 271 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 IGKV1D-43A0A0B4J1Z2 117 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 PATE3B3GLJ2 98 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 GSTZ1O43708 216 aaPredicted RBP16.8■□□□□ 0.28
MSLN-207ENST00000566549 GMDSO60547 372 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 PTH2RP49190 550 aa16.8■□□□□ 0.28
MSLN-207ENST00000566549 SNRPD2P62316 118 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms